Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608188

Identifier: 86608188

GI number: 86608188

Start: 719294

End: 720901

Strand: Direct

Name: 86608188

Synonym: CYB_0704

Alternate gene names: NA

Gene position: 719294-720901 (Clockwise)

Preceding gene: 86608186

Following gene: 86608193

Centisome position: 23.61

GC content: 60.32

Gene sequence:

>1608_bases
ATGGAAGGGGAAGAGGAGCTAAAAGCCTTGCGGGCGCGGGTGCGCAACCTAGAGCGATCCCTCGCCGAATCGGAAGCGCT
GTCATTGCAGCAGATTGAGTGCATCCATCGCCTGGAACATCAACTGCTGGAAGCACAGGCCCAGATTCAAGAGCGGGATC
AAGCTTTGCAAGCGTGTCAAGAGGAGAAAGCACGGCTGGCCCAGCGCCCTACCCCAGAGGCTTTTCAGCTTCAGCAACAG
CACATCGAAGAACTGCAGAATCTCCTGTGGGAAATGGAGCGCCGTCCAACGCTGGAGCACTACCACATTCTGCAGCAGCA
GTTGCAAACCAGTCAGACGGAAATTGAAACCCTCAAGGCGGAATTGCAGCGGCGCGTCGATCCGGCCCGATTTTACCAAC
TGCAGCAGGAGCTCCTGGAGCTGAAACAGCAGGCCAACCAATTGGGAGAATACGCCGTCAAGTTGCCGCAGGTGCAGCTT
TTGCAAGCCCAACTGCAGCTCCGTGTACAGCAGCTAGAGGAGGAAAAAGCACAATTGCAAGCGCAAATCCAAGAGTTGGC
TGCTCGACCTTCTGCACAAGAACTGGAAACCCTACGGGCGGAGCTAGAGGCTGCCCACCGCCAAGCGGAAGCCGAATGGC
AGCGTTTGAAGACCCATCTGGAAACCGAAAAGGCACACATGGAAGCTGACCTGAACACCGCCCGGCAACGTATTCGCGAA
CTGGAAGAGCGTCCTACCCCAGAGCAATGGGCACGCTTGCAGGCGGAGCTGGATCATCTGCGCCAACAGGCCTCTTTTGC
CAAGGCCGAGCGGGCCACCTTGCTGGAAGAGCTGCAGCAGAGTCAGCGGCAGCAGGCCGAGCAAGCCCAACAGATTGCCA
AGCTGGAAGCGGAAGCAGCCCAGGCCGCCCACCTCAGGGAAACAGAGTCCTCACAGGCGCAGCGAATCCTTGCCCTGGAG
GAGCAGGTGCAGGCTTTGACCCGCGAGCTTGGTGCTTTGCGAGCCGAGCGGGATCAGCTCATGCAAGAGTTGGCCCAGCG
TCCCACCCTTGCCCAGTGGCAGGAAGTTCAGCAGCAGGTGCAGGACACCCGAGAAAGCCTGGAAGCAGCCCGGCGGGGGC
GAGAACTGGCCGAGGCCCATCATCTGGTCAGCCAAAAGCAAATCGAGAAGTTGCAGCAGCAGGTGATGGCTTTGAAAACC
GAGTGTGTGCAGGCCCACGCCTACGCGCAAACCCAAGAAAAGGAAGTGGCCCTGCTGCAGCAGCGCAATCAAGAACTGGA
AGAGCAACTGGCCACACTGCGTCAGTCGGCCTCCGCTTCCCCTCAGCCAGCGGTTGTCGAGGCCAGGTCGAATCATCGGG
CCCAGGAACGGATTCCTGCCGCGGCTGACGAGTCTGCTCCTTCCCCGGCCACCACCTGGAGAACACCCACCCCAGGGATC
CCGCCGCTCACCCTGGACGAGCGGGAAGAAAGTGCCCCGCTCGGCTGGCGCCAACGGACAGAAAGGCTCCTGAAACGCTC
CGCTTTGGCCGCTTCACGGGCAGGAGGGGAAACGGGCAGTCGCAACCGGATTGAGTTGCCGACTTTTGTGCAGCGGCGGC
CCTACTGA

Upstream 100 bases:

>100_bases
TGGGAAAAGCTAAAAATTTACACTACAGATAGTGGCGAGCTGGATTTTCATCCAGACCATCTGCTACAGTAAGGCCCATA
ACCTGTCGAGCAGCCTGGAT

Downstream 100 bases:

>100_bases
GCGCTCCATTCTCGGGGATCCAACCGTTCTCCGGCTTGAAAACGAGGCCAAGCCCAGCGCAGCAGGGATCCCAATTGGGC
GTGAAATCGCTCCGGGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MEGEEELKALRARVRNLERSLAESEALSLQQIECIHRLEHQLLEAQAQIQERDQALQACQEEKARLAQRPTPEAFQLQQQ
HIEELQNLLWEMERRPTLEHYHILQQQLQTSQTEIETLKAELQRRVDPARFYQLQQELLELKQQANQLGEYAVKLPQVQL
LQAQLQLRVQQLEEEKAQLQAQIQELAARPSAQELETLRAELEAAHRQAEAEWQRLKTHLETEKAHMEADLNTARQRIRE
LEERPTPEQWARLQAELDHLRQQASFAKAERATLLEELQQSQRQQAEQAQQIAKLEAEAAQAAHLRETESSQAQRILALE
EQVQALTRELGALRAERDQLMQELAQRPTLAQWQEVQQQVQDTRESLEAARRGRELAEAHHLVSQKQIEKLQQQVMALKT
ECVQAHAYAQTQEKEVALLQQRNQELEEQLATLRQSASASPQPAVVEARSNHRAQERIPAAADESAPSPATTWRTPTPGI
PPLTLDEREESAPLGWRQRTERLLKRSALAASRAGGETGSRNRIELPTFVQRRPY

Sequences:

>Translated_535_residues
MEGEEELKALRARVRNLERSLAESEALSLQQIECIHRLEHQLLEAQAQIQERDQALQACQEEKARLAQRPTPEAFQLQQQ
HIEELQNLLWEMERRPTLEHYHILQQQLQTSQTEIETLKAELQRRVDPARFYQLQQELLELKQQANQLGEYAVKLPQVQL
LQAQLQLRVQQLEEEKAQLQAQIQELAARPSAQELETLRAELEAAHRQAEAEWQRLKTHLETEKAHMEADLNTARQRIRE
LEERPTPEQWARLQAELDHLRQQASFAKAERATLLEELQQSQRQQAEQAQQIAKLEAEAAQAAHLRETESSQAQRILALE
EQVQALTRELGALRAERDQLMQELAQRPTLAQWQEVQQQVQDTRESLEAARRGRELAEAHHLVSQKQIEKLQQQVMALKT
ECVQAHAYAQTQEKEVALLQQRNQELEEQLATLRQSASASPQPAVVEARSNHRAQERIPAAADESAPSPATTWRTPTPGI
PPLTLDEREESAPLGWRQRTERLLKRSALAASRAGGETGSRNRIELPTFVQRRPY
>Mature_535_residues
MEGEEELKALRARVRNLERSLAESEALSLQQIECIHRLEHQLLEAQAQIQERDQALQACQEEKARLAQRPTPEAFQLQQQ
HIEELQNLLWEMERRPTLEHYHILQQQLQTSQTEIETLKAELQRRVDPARFYQLQQELLELKQQANQLGEYAVKLPQVQL
LQAQLQLRVQQLEEEKAQLQAQIQELAARPSAQELETLRAELEAAHRQAEAEWQRLKTHLETEKAHMEADLNTARQRIRE
LEERPTPEQWARLQAELDHLRQQASFAKAERATLLEELQQSQRQQAEQAQQIAKLEAEAAQAAHLRETESSQAQRILALE
EQVQALTRELGALRAERDQLMQELAQRPTLAQWQEVQQQVQDTRESLEAARRGRELAEAHHLVSQKQIEKLQQQVMALKT
ECVQAHAYAQTQEKEVALLQQRNQELEEQLATLRQSASASPQPAVVEARSNHRAQERIPAAADESAPSPATTWRTPTPGI
PPLTLDEREESAPLGWRQRTERLLKRSALAASRAGGETGSRNRIELPTFVQRRPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61696; Mature: 61696

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGEEELKALRARVRNLERSLAESEALSLQQIECIHRLEHQLLEAQAQIQERDQALQACQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEKARLAQRPTPEAFQLQQQHIEELQNLLWEMERRPTLEHYHILQQQLQTSQTEIETLKA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ELQRRVDPARFYQLQQELLELKQQANQLGEYAVKLPQVQLLQAQLQLRVQQLEEEKAQLQ
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
AQIQELAARPSAQELETLRAELEAAHRQAEAEWQRLKTHLETEKAHMEADLNTARQRIRE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEERPTPEQWARLQAELDHLRQQASFAKAERATLLEELQQSQRQQAEQAQQIAKLEAEAA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAHLRETESSQAQRILALEEQVQALTRELGALRAERDQLMQELAQRPTLAQWQEVQQQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QDTRESLEAARRGRELAEAHHLVSQKQIEKLQQQVMALKTECVQAHAYAQTQEKEVALLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRNQELEEQLATLRQSASASPQPAVVEARSNHRAQERIPAAADESAPSPATTWRTPTPGI
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
PPLTLDEREESAPLGWRQRTERLLKRSALAASRAGGETGSRNRIELPTFVQRRPY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MEGEEELKALRARVRNLERSLAESEALSLQQIECIHRLEHQLLEAQAQIQERDQALQACQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEKARLAQRPTPEAFQLQQQHIEELQNLLWEMERRPTLEHYHILQQQLQTSQTEIETLKA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ELQRRVDPARFYQLQQELLELKQQANQLGEYAVKLPQVQLLQAQLQLRVQQLEEEKAQLQ
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
AQIQELAARPSAQELETLRAELEAAHRQAEAEWQRLKTHLETEKAHMEADLNTARQRIRE
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEERPTPEQWARLQAELDHLRQQASFAKAERATLLEELQQSQRQQAEQAQQIAKLEAEAA
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAHLRETESSQAQRILALEEQVQALTRELGALRAERDQLMQELAQRPTLAQWQEVQQQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QDTRESLEAARRGRELAEAHHLVSQKQIEKLQQQVMALKTECVQAHAYAQTQEKEVALLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRNQELEEQLATLRQSASASPQPAVVEARSNHRAQERIPAAADESAPSPATTWRTPTPGI
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
PPLTLDEREESAPLGWRQRTERLLKRSALAASRAGGETGSRNRIELPTFVQRRPY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA