| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608162
Identifier: 86608162
GI number: 86608162
Start: 688191
End: 689507
Strand: Direct
Name: 86608162
Synonym: CYB_0676
Alternate gene names: NA
Gene position: 688191-689507 (Clockwise)
Preceding gene: 86608161
Following gene: 86608163
Centisome position: 22.59
GC content: 64.77
Gene sequence:
>1317_bases ATGTTGGATCTGGTTAAGCTGAGCGGGCAAATTCCTGCGTTCACCCGGCACCTGCAACAGGAGTCGAAAGCCAGCCAAGA ACGCCTCCGCCAAGCCTGGCAAGTTTTCGAGCGCTGGCAGCAGGAGCCGCAGGTTTGGCAGTCCCGCTGGGTGGAGTGGG GATCCCATCTGTCGTTTGTTTGCGCCAGCCCTGCCGAGCCGCCGGAAGCTTGGGGATCCCTGCCCAAGGTCGAGCCTCTG CAGGGGCGACACACGGTGGTGGCCACGGATGGATCCCAGATTTTGCCCAGTCACCACGAGATTGCCTACTGCTCGCTGAT CAATGTTGGGCGCGTGGTTCTCCACTACGGCACCCAGGAGTGGCCGCTCCTGGACAGCCAGCCCCTGCTGCTGTATGGAG ATGGGCCCCTTGCCCAGCAAAACCGCTCAGACTCCCCTCTCTCGGAACCGCGGGCAGAAGGGTTGCCGAGGGCCCCCCTT AACCGGCGAGACTCTCGCCCGCAGCGCGCTCCAGGTGAACGCAATCCTACCAGCGGCACGGAGTCCTCGTTGGGGCTGGA AGAGATACTGGCCTTACGACGCTCCCAAGCGGAACTGGAGGAGCTGGCTCGTTTGGCCCTGTCGGTGCCCCGTCGCCGCA CCACGCTGGCGCTCCTGGATGGATCCCTAATCCCTTGGGGACTGGAGCCTCTGCCCCAGTCGGCCCGGCGCCCCTGGTTG GATCCCATTCTGGCGACCTTGGAGCAGTTGCGGGCGGCCCGCATTCCTCTCGTGGGTTACATCAGCGCCTCCCGCAGCAG CGAAACCCTCAACTACCTGCGCTTGGGGCTGTGCCCGTACCTGGGCTGTGACTGCTACCGCTACTGTCCCGGCGAGAAGT CTCCTCCCTGCCATCCCTTCGCCCCCCTGGCAGACCGCGTCTTTTGGGGATCCCTGCTGCAGCCGGGAGAGCGCAGCCCC CTTTGGCGCAGCGGCGCCAGCGTGTTGGACGCCTTCGGGGAACACCACGTCCACTGTTGTTACCTCAATGTTGGCGAGGG ATCCCTGGGCCAAGCCGAAATTGCTCGCCTGGAGTTTCCCGCTTGGGTGGTCCAGGATGCGGAGTTGCTGCAGCGGGCTC TGGCAGGGGTGCTGAGCCAAGTGCACAAGGGCTTTGGCTACCCCATCGCCTTGGCGGAAGCCCATCATTTGGCGGTGGTG AGAAGCGGGGATCGGCAGCGGTTTTTTGCCTTGATCGAGCAGGAGCTGCTCCGGGCCGGCCTGCGCCACGTGGCCGTCTC CCGCAAGGAAGCCCAGAAGCGGAGTGGCATTGCCTGA
Upstream 100 bases:
>100_bases GAGTTTCCGCTGGAAGAGCTGCTCAACTCCTCAGAAGGACAAGATGTGGCTTCTTCCGCTTCTGGCAGCCGTATTGCCAT GCAGGGCTGATGCGGCCATC
Downstream 100 bases:
>100_bases ACCGACGCCGGGGATCCCTGGCACCCAAGAGAAGGCTATAGCCTATTGAGGGGATCCCCATTCAACGGCTAGGGTTGCCA AGGTGTCCCAATCCTGTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MLDLVKLSGQIPAFTRHLQQESKASQERLRQAWQVFERWQQEPQVWQSRWVEWGSHLSFVCASPAEPPEAWGSLPKVEPL QGRHTVVATDGSQILPSHHEIAYCSLINVGRVVLHYGTQEWPLLDSQPLLLYGDGPLAQQNRSDSPLSEPRAEGLPRAPL NRRDSRPQRAPGERNPTSGTESSLGLEEILALRRSQAELEELARLALSVPRRRTTLALLDGSLIPWGLEPLPQSARRPWL DPILATLEQLRAARIPLVGYISASRSSETLNYLRLGLCPYLGCDCYRYCPGEKSPPCHPFAPLADRVFWGSLLQPGERSP LWRSGASVLDAFGEHHVHCCYLNVGEGSLGQAEIARLEFPAWVVQDAELLQRALAGVLSQVHKGFGYPIALAEAHHLAVV RSGDRQRFFALIEQELLRAGLRHVAVSRKEAQKRSGIA
Sequences:
>Translated_438_residues MLDLVKLSGQIPAFTRHLQQESKASQERLRQAWQVFERWQQEPQVWQSRWVEWGSHLSFVCASPAEPPEAWGSLPKVEPL QGRHTVVATDGSQILPSHHEIAYCSLINVGRVVLHYGTQEWPLLDSQPLLLYGDGPLAQQNRSDSPLSEPRAEGLPRAPL NRRDSRPQRAPGERNPTSGTESSLGLEEILALRRSQAELEELARLALSVPRRRTTLALLDGSLIPWGLEPLPQSARRPWL DPILATLEQLRAARIPLVGYISASRSSETLNYLRLGLCPYLGCDCYRYCPGEKSPPCHPFAPLADRVFWGSLLQPGERSP LWRSGASVLDAFGEHHVHCCYLNVGEGSLGQAEIARLEFPAWVVQDAELLQRALAGVLSQVHKGFGYPIALAEAHHLAVV RSGDRQRFFALIEQELLRAGLRHVAVSRKEAQKRSGIA >Mature_438_residues MLDLVKLSGQIPAFTRHLQQESKASQERLRQAWQVFERWQQEPQVWQSRWVEWGSHLSFVCASPAEPPEAWGSLPKVEPL QGRHTVVATDGSQILPSHHEIAYCSLINVGRVVLHYGTQEWPLLDSQPLLLYGDGPLAQQNRSDSPLSEPRAEGLPRAPL NRRDSRPQRAPGERNPTSGTESSLGLEEILALRRSQAELEELARLALSVPRRRTTLALLDGSLIPWGLEPLPQSARRPWL DPILATLEQLRAARIPLVGYISASRSSETLNYLRLGLCPYLGCDCYRYCPGEKSPPCHPFAPLADRVFWGSLLQPGERSP LWRSGASVLDAFGEHHVHCCYLNVGEGSLGQAEIARLEFPAWVVQDAELLQRALAGVLSQVHKGFGYPIALAEAHHLAVV RSGDRQRFFALIEQELLRAGLRHVAVSRKEAQKRSGIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48847; Mature: 48847
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLVKLSGQIPAFTRHLQQESKASQERLRQAWQVFERWQQEPQVWQSRWVEWGSHLSFV CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEE CASPAEPPEAWGSLPKVEPLQGRHTVVATDGSQILPSHHEIAYCSLINVGRVVLHYGTQE ECCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC WPLLDSQPLLLYGDGPLAQQNRSDSPLSEPRAEGLPRAPLNRRDSRPQRAPGERNPTSGT CCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESSLGLEEILALRRSQAELEELARLALSVPRRRTTLALLDGSLIPWGLEPLPQSARRPWL CHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCH DPILATLEQLRAARIPLVGYISASRSSETLNYLRLGLCPYLGCDCYRYCPGEKSPPCHPF HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCC APLADRVFWGSLLQPGERSPLWRSGASVLDAFGEHHVHCCYLNVGEGSLGQAEIARLEFP CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCC AWVVQDAELLQRALAGVLSQVHKGFGYPIALAEAHHLAVVRSGDRQRFFALIEQELLRAG HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHEEEEEECCCHHHHHHHHHHHHHHHH LRHVAVSRKEAQKRSGIA HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLDLVKLSGQIPAFTRHLQQESKASQERLRQAWQVFERWQQEPQVWQSRWVEWGSHLSFV CCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEE CASPAEPPEAWGSLPKVEPLQGRHTVVATDGSQILPSHHEIAYCSLINVGRVVLHYGTQE ECCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC WPLLDSQPLLLYGDGPLAQQNRSDSPLSEPRAEGLPRAPLNRRDSRPQRAPGERNPTSGT CCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESSLGLEEILALRRSQAELEELARLALSVPRRRTTLALLDGSLIPWGLEPLPQSARRPWL CHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCH DPILATLEQLRAARIPLVGYISASRSSETLNYLRLGLCPYLGCDCYRYCPGEKSPPCHPF HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCC APLADRVFWGSLLQPGERSPLWRSGASVLDAFGEHHVHCCYLNVGEGSLGQAEIARLEFP CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHCCC AWVVQDAELLQRALAGVLSQVHKGFGYPIALAEAHHLAVVRSGDRQRFFALIEQELLRAG HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHEEEEEECCCHHHHHHHHHHHHHHHH LRHVAVSRKEAQKRSGIA HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA