| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is hisB [H]
Identifier: 86608157
GI number: 86608157
Start: 684863
End: 685483
Strand: Direct
Name: hisB [H]
Synonym: CYB_0671
Alternate gene names: 86608157
Gene position: 684863-685483 (Clockwise)
Preceding gene: 86608156
Following gene: 86608158
Centisome position: 22.48
GC content: 59.74
Gene sequence:
>621_bases ATGACTGCCCTCGACTCCTCGCGCCTGCTCCAGCCCAGAACGGCCTCTGTTCACCGTCGCACTGGAGAAACGGATGTCCA AATTCATCTGAACCTGGATGGCAGCGGGCGCCATGAGATCGATACTGGGATCCCCTTTTTGGATCACATGCTGGCCCAGC TCAGCACCCACGGGCTGATCGACCTGCAGATCAAGGCCATAGGGGATCTGCACATCGACGATCACCACACCAACGAAGAT GTGGGCATCACGCTGGGACAAGCCCTGGCGCAGGCTCTGCAGGATCGGCGTGGCATTCATCGCTTCGGCCATTTTTGGGC ACCTTTGGATGAAGCTTTGGTGCAGGTGGTGCTGGATTTCTCCGGGCGTCCTCACCTCAGCTATGGCCTGGAGCTGCCCA CGGAGCGCATTGGCCGCTACGAAACCCAGTTGGTGCGGGAGTTTTATCAGGCGGTGGTCAACCACGCCCAGCTCACTTTG CACATTCGCCAGGCTGCCGGCCTCAATGCCCACCATATTGTCGAGGCCAGTTTTAAGGCGTTTGCCCGCGCCCTGCGCAT GGCCGTAGAACGGGATCCCCGCCGACAAGAAGGGATCCCCAGTTCGAAGGGAGTACTCTAG
Upstream 100 bases:
>100_bases GAGAAGGGATTCTCACCTGCTGCATGGGTGAAGGTGTCGATGGCGGCGGGCTTGTGCGATCCTAGAGCTGGGACTTCCCG CCTGCTTCGATACTTTTCCC
Downstream 100 bases:
>100_bases GCATGAACTGGCCACGGAGACTGTTGGCCTTGGCTCTGGGATTGGGGACAGTTTTCTTCGGTCTGGGCCAGATGGGGGGT GCAATTCTCAGTGTGGGCCT
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTALDSSRLLQPRTASVHRRTGETDVQIHLNLDGSGRHEIDTGIPFLDHMLAQLSTHGLIDLQIKAIGDLHIDDHHTNED VGITLGQALAQALQDRRGIHRFGHFWAPLDEALVQVVLDFSGRPHLSYGLELPTERIGRYETQLVREFYQAVVNHAQLTL HIRQAAGLNAHHIVEASFKAFARALRMAVERDPRRQEGIPSSKGVL
Sequences:
>Translated_206_residues MTALDSSRLLQPRTASVHRRTGETDVQIHLNLDGSGRHEIDTGIPFLDHMLAQLSTHGLIDLQIKAIGDLHIDDHHTNED VGITLGQALAQALQDRRGIHRFGHFWAPLDEALVQVVLDFSGRPHLSYGLELPTERIGRYETQLVREFYQAVVNHAQLTL HIRQAAGLNAHHIVEASFKAFARALRMAVERDPRRQEGIPSSKGVL >Mature_205_residues TALDSSRLLQPRTASVHRRTGETDVQIHLNLDGSGRHEIDTGIPFLDHMLAQLSTHGLIDLQIKAIGDLHIDDHHTNEDV GITLGQALAQALQDRRGIHRFGHFWAPLDEALVQVVLDFSGRPHLSYGLELPTERIGRYETQLVREFYQAVVNHAQLTLH IRQAAGLNAHHIVEASFKAFARALRMAVERDPRRQEGIPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=196, Percent_Identity=47.9591836734694, Blast_Score=175, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6324776, Length=221, Percent_Identity=39.3665158371041, Blast_Score=150, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 23053; Mature: 22922
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALDSSRLLQPRTASVHRRTGETDVQIHLNLDGSGRHEIDTGIPFLDHMLAQLSTHGLI CCCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEE DLQIKAIGDLHIDDHHTNEDVGITLGQALAQALQDRRGIHRFGHFWAPLDEALVQVVLDF EEEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC SGRPHLSYGLELPTERIGRYETQLVREFYQAVVNHAQLTLHIRQAAGLNAHHIVEASFKA CCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHHH FARALRMAVERDPRRQEGIPSSKGVL HHHHHHHHHHCCCCHHCCCCCCCCCC >Mature Secondary Structure TALDSSRLLQPRTASVHRRTGETDVQIHLNLDGSGRHEIDTGIPFLDHMLAQLSTHGLI CCCCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEE DLQIKAIGDLHIDDHHTNEDVGITLGQALAQALQDRRGIHRFGHFWAPLDEALVQVVLDF EEEEEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC SGRPHLSYGLELPTERIGRYETQLVREFYQAVVNHAQLTLHIRQAAGLNAHHIVEASFKA CCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHHH FARALRMAVERDPRRQEGIPSSKGVL HHHHHHHHHHCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA