| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608156
Identifier: 86608156
GI number: 86608156
Start: 684447
End: 684827
Strand: Direct
Name: 86608156
Synonym: CYB_0670
Alternate gene names: NA
Gene position: 684447-684827 (Clockwise)
Preceding gene: 86608151
Following gene: 86608157
Centisome position: 22.47
GC content: 61.15
Gene sequence:
>381_bases GTGTTGCTTGAGGGCCTGTTGGATTTGCTGCCAATCCTGCAAACGGCAACCCCCTTTTCAACAATTTCCTTCAGCAATCT ACAGCGATTTCGGGAGAAGCTGTCTTATAGGCTATTTCAAATCCCGCTGAACCTGCTAGCTCCCCTCTCCCAAGGGGTGA GGGCGCAGAGGATCGGCCCCACCGGCTTGCCTGTAGGGGATCCCTGTCACACCTATCCCCGTGTCCAGGGGGCTGGGGCG CTAGCTGACCCCCGGGTGGCGCGGGTGGCGCCCACCTATCCCCGTGTCCAGGGGGCTGGGATCAGGATCCCCGGCAGAGA AGGGATTCTCACCTGCTGCATGGGTGAAGGTGTCGATGGCGGCGGGCTTGTGCGATCCTAG
Upstream 100 bases:
>100_bases ATTTGCCAAACCCCGTCGGCAACACCACCAGCGCGTCGCGCTTGTCCAGCAGAGCGCGGATCACCTGATCCTGGGGTGGG CGCAGCGTCTCGTAACCCCA
Downstream 100 bases:
>100_bases AGCTGGGACTTCCCGCCTGCTTCGATACTTTTCCCATGACTGCCCTCGACTCCTCGCGCCTGCTCCAGCCCAGAACGGCC TCTGTTCACCGTCGCACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MLLEGLLDLLPILQTATPFSTISFSNLQRFREKLSYRLFQIPLNLLAPLSQGVRAQRIGPTGLPVGDPCHTYPRVQGAGA LADPRVARVAPTYPRVQGAGIRIPGREGILTCCMGEGVDGGGLVRS
Sequences:
>Translated_126_residues MLLEGLLDLLPILQTATPFSTISFSNLQRFREKLSYRLFQIPLNLLAPLSQGVRAQRIGPTGLPVGDPCHTYPRVQGAGA LADPRVARVAPTYPRVQGAGIRIPGREGILTCCMGEGVDGGGLVRS >Mature_126_residues MLLEGLLDLLPILQTATPFSTISFSNLQRFREKLSYRLFQIPLNLLAPLSQGVRAQRIGPTGLPVGDPCHTYPRVQGAGA LADPRVARVAPTYPRVQGAGIRIPGREGILTCCMGEGVDGGGLVRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13480; Mature: 13480
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLEGLLDLLPILQTATPFSTISFSNLQRFREKLSYRLFQIPLNLLAPLSQGVRAQRIGP CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC TGLPVGDPCHTYPRVQGAGALADPRVARVAPTYPRVQGAGIRIPGREGILTCCMGEGVDG CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCC GGLVRS CCCCCC >Mature Secondary Structure MLLEGLLDLLPILQTATPFSTISFSNLQRFREKLSYRLFQIPLNLLAPLSQGVRAQRIGP CHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC TGLPVGDPCHTYPRVQGAGALADPRVARVAPTYPRVQGAGIRIPGREGILTCCMGEGVDG CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCC GGLVRS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA