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The map label for this gene is yrbE [H]

Identifier: 86608138

GI number: 86608138

Start: 663342

End: 664406

Strand: Direct

Name: yrbE [H]

Synonym: CYB_0650

Alternate gene names: 86608138

Gene position: 663342-664406 (Clockwise)

Preceding gene: 86608137

Following gene: 86608140

Centisome position: 21.77

GC content: 58.31

Gene sequence:

>1065_bases
ATGGCCCGATCTTGCCCGAGTTCTGCCAACTCTCCCCGCCGTCCACTGGCTTATTCAGAGCAAGCTGTCCCGGTTGGGGT
GATCGGGGTAGGCAACATGGGCCAGCACCACACCCGCGTTTTCAGCCTGATGAAGGATGTGCGGGTCGTGGGGGTAGCGG
ATATCAACGTGGAACGGGGATTGGATGTGGCCAGCCGCCACCGCGTTCATTTTTATGAGGACTACCGCGATCTGCTGCCC
CACGTAGCTGCCGTGGCCATTGCCGTGCCGACGGTTCTGCACCATGAGGTGGGTATGGCCTGCCTGGAGGCCGGGGTACA
TGTGCTGATCGAAAAGCCCATCGCTGCCAGCATCAGCGAAGCAGAATCGCTGGTGAACCGAGCTGCCGATTGCAATTGTA
TTTTGCAGGTGGGGCACATCGAGCGCTTCAGCCCTGTTTTCCAAAAGCTGGGCCAAGTCTTGCAAAGTGAAGAACCTCTG
GCTTTCGAGGCTCACCGTCTCAGCCCCTATTCCGACCGCGCCAGCGATGTGTCGGTGGTATTCGACTTGATGATCCACGA
CATCGATCTGTTGCTGGAGCTGATCCCATCTCCCGTGACCCAGATTACCGCCAGCGGCAACCGCATCTCCAAGCTGGGCT
ACCTGGACTACGTCACGGCTACTCTCACTTTTGCCAACGGTGCCATCGCCACCCTCACCGCCAGCAAGGTCACCCACCGC
AAGGTGCGCAAAATTGCCGTCCACTGCAAGAATGCCTTGGTAGAAGCAGATTTTCTACACAATGAGATCTCGGTGTACCG
CCAGGGATCCGTCGGCAGCACCAGCGACTACGGCCAAATGCCCTACCAGCGGGATTGTTTGATTGAGAAAGTCCACACCG
ACAATATCGACAAGCTGCATGCCGAACTGGAGCACTTCATCAACTGCGTGCGGGGAGGCAACCAACCTTCCGTAGGTGGG
GAGCAGGCCCTGAAAGCTTTGAGGCTGGCCTCGGAGGTAGAGCGGATTGCTTTGGATGGATGTGCCTGGAGCGAAGCCAA
GCCCCGCCGTAGTCTCCTATCCTAG

Upstream 100 bases:

>100_bases
GGTAAGCTTTGTGAAGTTTGTTTCGTGAAATGCGGCGCTCCGTTACCGAAAGATGGAGCGAGGTTCGCGAAACCCTTGTG
GTAGAGGTAGTGGAAACGTC

Downstream 100 bases:

>100_bases
TCTTTAACGCAAGCCCCAGATGGGGGCAGAGCCCTGTTGTTGGCCCATAGCCATTCCAGCATCAGGCTGGGGAAGAAAAA
GCAACATTCGCGCCCGCGGA

Product: oxidoreductase, NAD-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MARSCPSSANSPRRPLAYSEQAVPVGVIGVGNMGQHHTRVFSLMKDVRVVGVADINVERGLDVASRHRVHFYEDYRDLLP
HVAAVAIAVPTVLHHEVGMACLEAGVHVLIEKPIAASISEAESLVNRAADCNCILQVGHIERFSPVFQKLGQVLQSEEPL
AFEAHRLSPYSDRASDVSVVFDLMIHDIDLLLELIPSPVTQITASGNRISKLGYLDYVTATLTFANGAIATLTASKVTHR
KVRKIAVHCKNALVEADFLHNEISVYRQGSVGSTSDYGQMPYQRDCLIEKVHTDNIDKLHAELEHFINCVRGGNQPSVGG
EQALKALRLASEVERIALDGCAWSEAKPRRSLLS

Sequences:

>Translated_354_residues
MARSCPSSANSPRRPLAYSEQAVPVGVIGVGNMGQHHTRVFSLMKDVRVVGVADINVERGLDVASRHRVHFYEDYRDLLP
HVAAVAIAVPTVLHHEVGMACLEAGVHVLIEKPIAASISEAESLVNRAADCNCILQVGHIERFSPVFQKLGQVLQSEEPL
AFEAHRLSPYSDRASDVSVVFDLMIHDIDLLLELIPSPVTQITASGNRISKLGYLDYVTATLTFANGAIATLTASKVTHR
KVRKIAVHCKNALVEADFLHNEISVYRQGSVGSTSDYGQMPYQRDCLIEKVHTDNIDKLHAELEHFINCVRGGNQPSVGG
EQALKALRLASEVERIALDGCAWSEAKPRRSLLS
>Mature_353_residues
ARSCPSSANSPRRPLAYSEQAVPVGVIGVGNMGQHHTRVFSLMKDVRVVGVADINVERGLDVASRHRVHFYEDYRDLLPH
VAAVAIAVPTVLHHEVGMACLEAGVHVLIEKPIAASISEAESLVNRAADCNCILQVGHIERFSPVFQKLGQVLQSEEPLA
FEAHRLSPYSDRASDVSVVFDLMIHDIDLLLELIPSPVTQITASGNRISKLGYLDYVTATLTFANGAIATLTASKVTHRK
VRKIAVHCKNALVEADFLHNEISVYRQGSVGSTSDYGQMPYQRDCLIEKVHTDNIDKLHAELEHFINCVRGGNQPSVGGE
QALKALRLASEVERIALDGCAWSEAKPRRSLLS

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787307, Length=326, Percent_Identity=24.5398773006135, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: NA

Molecular weight: Translated: 38721; Mature: 38590

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSCPSSANSPRRPLAYSEQAVPVGVIGVGNMGQHHTRVFSLMKDVRVVGVADINVERG
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEEECCHHHC
LDVASRHRVHFYEDYRDLLPHVAAVAIAVPTVLHHEVGMACLEAGVHVLIEKPIAASISE
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHH
AESLVNRAADCNCILQVGHIERFSPVFQKLGQVLQSEEPLAFEAHRLSPYSDRASDVSVV
HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEHHCCCCCCCCCHHHHHH
FDLMIHDIDLLLELIPSPVTQITASGNRISKLGYLDYVTATLTFANGAIATLTASKVTHR
HHHHHHHHHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH
KVRKIAVHCKNALVEADFLHNEISVYRQGSVGSTSDYGQMPYQRDCLIEKVHTDNIDKLH
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHH
AELEHFINCVRGGNQPSVGGEQALKALRLASEVERIALDGCAWSEAKPRRSLLS
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
ARSCPSSANSPRRPLAYSEQAVPVGVIGVGNMGQHHTRVFSLMKDVRVVGVADINVERG
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEEECCHHHC
LDVASRHRVHFYEDYRDLLPHVAAVAIAVPTVLHHEVGMACLEAGVHVLIEKPIAASISE
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHH
AESLVNRAADCNCILQVGHIERFSPVFQKLGQVLQSEEPLAFEAHRLSPYSDRASDVSVV
HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEHHCCCCCCCCCHHHHHH
FDLMIHDIDLLLELIPSPVTQITASGNRISKLGYLDYVTATLTFANGAIATLTASKVTHR
HHHHHHHHHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHH
KVRKIAVHCKNALVEADFLHNEISVYRQGSVGSTSDYGQMPYQRDCLIEKVHTDNIDKLH
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHH
AELEHFINCVRGGNQPSVGGEQALKALRLASEVERIALDGCAWSEAKPRRSLLS
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]