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The map label for this gene is ndhM [H]

Identifier: 86608132

GI number: 86608132

Start: 654687

End: 655052

Strand: Direct

Name: ndhM [H]

Synonym: CYB_0644

Alternate gene names: 86608132

Gene position: 654687-655052 (Clockwise)

Preceding gene: 86608130

Following gene: 86608133

Centisome position: 21.49

GC content: 55.46

Gene sequence:

>366_bases
ATGCTGAAATGCACCACTCGCCACGTCCACATTTTTGCCGGTGAAGTTACTGCAGACAACAACTTCGTGCCCCGCGACGA
CCTGTTTACCCTCGATGTGGATCCGGACAACGAGCTGGTCTGGACTGATGCTGCCCTGCAAAAGGTCTATGCCCGTTTCG
AAGAGTTGGTGGAAGAATACCGGGGGCGAGACTTGACCGAGTACAATATCCGCCGCATTGGGTCTGACCTGGAACATTTC
ATCCGCTCCCTGCTCAAGCAAGGGGAGATTGCCTACAACCTGCAGGGGCGTGCCCCCAACTTCAGCATGGGCTTTCCCCA
GATCCCTGCTGAAGAAATTGTCGGCCAATACATCCCCAAGGGCTAG

Upstream 100 bases:

>100_bases
GAGAGGGCCGGAACAAGTCGAGGGCAAATAGCGGATCCCCCACAAGCGCTAGGTAATGATACGCTGTTTAGCAGGTTAGA
TCCGGAGCGGAGCCATCGCA

Downstream 100 bases:

>100_bases
CTCTTTGCCGGTTCTGGACAGAGTTTTTGATTGTTCTGCATCTAAGGCTTTTACCCATCTGATTGTCGGAGCGTTTCCCC
ATGTCTGGAGAACCCACCCC

Product: hypothetical protein

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I subunit M; NDH-1 subunit M; NDH-M [H]

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MLKCTTRHVHIFAGEVTADNNFVPRDDLFTLDVDPDNELVWTDAALQKVYARFEELVEEYRGRDLTEYNIRRIGSDLEHF
IRSLLKQGEIAYNLQGRAPNFSMGFPQIPAEEIVGQYIPKG

Sequences:

>Translated_121_residues
MLKCTTRHVHIFAGEVTADNNFVPRDDLFTLDVDPDNELVWTDAALQKVYARFEELVEEYRGRDLTEYNIRRIGSDLEHF
IRSLLKQGEIAYNLQGRAPNFSMGFPQIPAEEIVGQYIPKG
>Mature_121_residues
MLKCTTRHVHIFAGEVTADNNFVPRDDLFTLDVDPDNELVWTDAALQKVYARFEELVEEYRGRDLTEYNIRRIGSDLEHF
IRSLLKQGEIAYNLQGRAPNFSMGFPQIPAEEIVGQYIPKG

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhM subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018922 [H]

Pfam domain/function: PF10664 DUF2485 [H]

EC number: 1.6.5.3

Molecular weight: Translated: 13946; Mature: 13946

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKCTTRHVHIFAGEVTADNNFVPRDDLFTLDVDPDNELVWTDAALQKVYARFEELVEEY
CCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHH
RGRDLTEYNIRRIGSDLEHFIRSLLKQGEIAYNLQGRAPNFSMGFPQIPAEEIVGQYIPK
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCC
G
C
>Mature Secondary Structure
MLKCTTRHVHIFAGEVTADNNFVPRDDLFTLDVDPDNELVWTDAALQKVYARFEELVEEY
CCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHH
RGRDLTEYNIRRIGSDLEHFIRSLLKQGEIAYNLQGRAPNFSMGFPQIPAEEIVGQYIPK
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA