Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608106
Identifier: 86608106
GI number: 86608106
Start: 626315
End: 626986
Strand: Direct
Name: 86608106
Synonym: CYB_0618
Alternate gene names: NA
Gene position: 626315-626986 (Clockwise)
Preceding gene: 86608105
Following gene: 86608108
Centisome position: 20.56
GC content: 60.27
Gene sequence:
>672_bases ATGTTCTACCTGCCGGTCTCGCTGCTGTTGTTTTTCATGCTGGTGTTGCTGCTGCCTTTCCTCTGGCTGGGGCTGGCAGT GGATGTGGTGGCGCTGGCGGTGGGAAAGCTGGGGTTCTCGCGGGAGGGAGCGCTGTTACTGCTGCTGGCCATCCTGGTGG GCAGCTCGGTCAATATTCCCCTCTATCGGGTGAAATGCGAGGTGACGCTGGTAGAAGACCTAGCTAGCTTGTGGATGCGG CAGTTCTGGGGGATCCCTTTGACCAAGCTTTCCCAGGAGACGGTGATTGCCTTGAACGTGGGCGGGGGGCTGATCCCGGT GCTCTTGGCCCTATATCAATTTGGGCGGGCCGACAGCGTGCTGATCCTGGCGGTGACGGCGCTGGTAACCTTGGTCAGCT ACTATGCTTCCCACGTGGTGCCGGGGATCGGCATTCAAATGAACCCCTTGATTGCCCCGGCTACGGCAGCCTTAGCCGCT CTGTTTTGGGCAGGGGACCAGGCACCGGCAGTGGCCTTTGCTGGTGGAGTTTTGGGCACGGTGATCGGGGCAGATCTCCT GCATCTGCCAGAAGTCCTGCGGCGCAACTGCTCTGGCATTCTCAGCATTGGCGGGGCCGGGGTTTTCGATGGTATTGCCC TCTGTGGCTTGTTTGCCCTGCTGCTGAGCTAA
Upstream 100 bases:
>100_bases GAATAAAGTTTAGTTGCAAACCTAACTTTCTCAGGGGGCACGCAGCTGAGAAAAGTTGAACCGAGTCCTGATAGGCTGAA GAAAAGTTGGGATCCCTGCC
Downstream 100 bases:
>100_bases ACCAGCAAATAGGTAAGGGAAAGGGTGATGGATTGGGCGGGATCCAGCCAACGCAAGTCGGGATCCCCTAAGGACTCCGT CCCGCTGGCGCGATCGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MFYLPVSLLLFFMLVLLLPFLWLGLAVDVVALAVGKLGFSREGALLLLLAILVGSSVNIPLYRVKCEVTLVEDLASLWMR QFWGIPLTKLSQETVIALNVGGGLIPVLLALYQFGRADSVLILAVTALVTLVSYYASHVVPGIGIQMNPLIAPATAALAA LFWAGDQAPAVAFAGGVLGTVIGADLLHLPEVLRRNCSGILSIGGAGVFDGIALCGLFALLLS
Sequences:
>Translated_223_residues MFYLPVSLLLFFMLVLLLPFLWLGLAVDVVALAVGKLGFSREGALLLLLAILVGSSVNIPLYRVKCEVTLVEDLASLWMR QFWGIPLTKLSQETVIALNVGGGLIPVLLALYQFGRADSVLILAVTALVTLVSYYASHVVPGIGIQMNPLIAPATAALAA LFWAGDQAPAVAFAGGVLGTVIGADLLHLPEVLRRNCSGILSIGGAGVFDGIALCGLFALLLS >Mature_223_residues MFYLPVSLLLFFMLVLLLPFLWLGLAVDVVALAVGKLGFSREGALLLLLAILVGSSVNIPLYRVKCEVTLVEDLASLWMR QFWGIPLTKLSQETVIALNVGGGLIPVLLALYQFGRADSVLILAVTALVTLVSYYASHVVPGIGIQMNPLIAPATAALAA LFWAGDQAPAVAFAGGVLGTVIGADLLHLPEVLRRNCSGILSIGGAGVFDGIALCGLFALLLS
Specific function: Unknown
COG id: COG4089
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23398; Mature: 23398
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYLPVSLLLFFMLVLLLPFLWLGLAVDVVALAVGKLGFSREGALLLLLAILVGSSVNIP CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC LYRVKCEVTLVEDLASLWMRQFWGIPLTKLSQETVIALNVGGGLIPVLLALYQFGRADSV EEEEEEHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCHH LILAVTALVTLVSYYASHVVPGIGIQMNPLIAPATAALAALFWAGDQAPAVAFAGGVLGT HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH VIGADLLHLPEVLRRNCSGILSIGGAGVFDGIALCGLFALLLS HHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure MFYLPVSLLLFFMLVLLLPFLWLGLAVDVVALAVGKLGFSREGALLLLLAILVGSSVNIP CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC LYRVKCEVTLVEDLASLWMRQFWGIPLTKLSQETVIALNVGGGLIPVLLALYQFGRADSV EEEEEEHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCHH LILAVTALVTLVSYYASHVVPGIGIQMNPLIAPATAALAALFWAGDQAPAVAFAGGVLGT HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH VIGADLLHLPEVLRRNCSGILSIGGAGVFDGIALCGLFALLLS HHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA