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The map label for this gene is cas6

Identifier: 86608087

GI number: 86608087

Start: 603175

End: 604356

Strand: Direct

Name: cas6

Synonym: CYB_0596

Alternate gene names: NA

Gene position: 603175-604356 (Clockwise)

Preceding gene: 86608075

Following gene: 86608088

Centisome position: 19.8

GC content: 62.18

Gene sequence:

>1182_bases
GTGTTGATTGTTGCTGTGGACTGGGAATGGGCTGTGCCTATGCTGAGTTTCTCAGAGCCATCTGCTGATAGAGAAGCGAA
CGGCAAGTGGCCGACGGGATCCGAGTTGGTGGGGATCACCTTGGAAGTTCAGGCTCCTCGGTCTTACCTGCTGGATCCCC
ACTATGCCAAAGGGCTGCACGCCTGGTTCTTGAGCCAGGTGCAAGAGACAGACCCGCAGCTATCGGCCTATTTGCACGAT
GGAGAATCGGAGAAACCTTTTACCCTCTCCCGGCTGATGGGGCCGTTCCGCGAGCAGGGGGGGCGACCGCTGATCCCGCC
TCATCTCCCCTTCCGCTGGTGGATCACCGGCCTCAACCCGCCGGTGGTGGAGTGGCTGCGAGGGTGGTGCCAACGGCTGC
CCACTTGGCTGGAATTGCGGGGATCCCCGCTGCAGATCCTGGGATGGCAGATCTCGATCCCCCCGCGCACCTATCGTCAA
CTGTTGGAGCAGCCTCTTTCCCCCCGCTCCTGGAGCCTTTCCTTCGTCTCGCCCACCAGCTTTCGCCACCGGGGCCACCA
TCTGCCGCTGCCGATCCCTCGCAACCTGTTCCACAGCTATCTGCGCCGTTGGAACGATTTTTCCGGTCTGCCCATCGAGG
CGGAGCCTTTTCTGGATTGGGTGGATGGGGAAGTGATCATCCAGCGGCACCGTCTGGAATCGGTCAAAACCACCGCAGGT
CGCCAGGGATCCGTGACGGGATTCATCGGCTGTGTGCAGTTGGCTGTCTCCTCCCGTGCGCCTGAGCTGTTGCAGCAGCA
GCTCCAAGCCCTGATCCACCTTGCCCCCTACTGCGGCACCGGCCACAAAACCCCCTTTGGGCTAGGGCAAACCCGCCTGG
GTTGGTTGGCCGAAGAGCTACCCGCCTCCCCTGTCCCTTCCCGGGAAGAGCAGGTGGCCCAGCGGATCGAGGAGCTGAGC
GCCCTCTTTCTCAGCCAGCGGCAACGACAAGGGGGATCCCGCGCCGAAAAAACTGCCCAACTGTGGGCGACGATCCTGGC
CCGCCGCGAAGGTGGAGAGAGCTTACAACAGATCGCCGCTGATTTGGAGATGCCCTACGAGACGGTGAAGACCTATGCCA
AGCTGGCCCGCCGCTCTCTCCAGTCTGGATCCCAGGACTACTCGTCGAGCAGTCTTCCCTAG

Upstream 100 bases:

>100_bases
AGATTGTGAGATTTTTTCTGCCTGTACAACGGGCAATTCGAGAGTAAACCCAATAAGAAGGGATCCCTTCTAAAATTTTC
TCAATGGAAAGTTGGGTTTT

Downstream 100 bases:

>100_bases
ATGACTTGAGGTACTTTGTTGAGCCTGATACATTCACGCTGAACTCTCCTGAACATGGTTCAGGAAAGAAGCGATCGCAT
CCTGCCTATCTCTGAGCAGG

Product: CRISPR-associated Cas family protein

Products: NA

Alternate protein names: CRISPR-Associated

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MLIVAVDWEWAVPMLSFSEPSADREANGKWPTGSELVGITLEVQAPRSYLLDPHYAKGLHAWFLSQVQETDPQLSAYLHD
GESEKPFTLSRLMGPFREQGGRPLIPPHLPFRWWITGLNPPVVEWLRGWCQRLPTWLELRGSPLQILGWQISIPPRTYRQ
LLEQPLSPRSWSLSFVSPTSFRHRGHHLPLPIPRNLFHSYLRRWNDFSGLPIEAEPFLDWVDGEVIIQRHRLESVKTTAG
RQGSVTGFIGCVQLAVSSRAPELLQQQLQALIHLAPYCGTGHKTPFGLGQTRLGWLAEELPASPVPSREEQVAQRIEELS
ALFLSQRQRQGGSRAEKTAQLWATILARREGGESLQQIAADLEMPYETVKTYAKLARRSLQSGSQDYSSSSLP

Sequences:

>Translated_393_residues
MLIVAVDWEWAVPMLSFSEPSADREANGKWPTGSELVGITLEVQAPRSYLLDPHYAKGLHAWFLSQVQETDPQLSAYLHD
GESEKPFTLSRLMGPFREQGGRPLIPPHLPFRWWITGLNPPVVEWLRGWCQRLPTWLELRGSPLQILGWQISIPPRTYRQ
LLEQPLSPRSWSLSFVSPTSFRHRGHHLPLPIPRNLFHSYLRRWNDFSGLPIEAEPFLDWVDGEVIIQRHRLESVKTTAG
RQGSVTGFIGCVQLAVSSRAPELLQQQLQALIHLAPYCGTGHKTPFGLGQTRLGWLAEELPASPVPSREEQVAQRIEELS
ALFLSQRQRQGGSRAEKTAQLWATILARREGGESLQQIAADLEMPYETVKTYAKLARRSLQSGSQDYSSSSLP
>Mature_393_residues
MLIVAVDWEWAVPMLSFSEPSADREANGKWPTGSELVGITLEVQAPRSYLLDPHYAKGLHAWFLSQVQETDPQLSAYLHD
GESEKPFTLSRLMGPFREQGGRPLIPPHLPFRWWITGLNPPVVEWLRGWCQRLPTWLELRGSPLQILGWQISIPPRTYRQ
LLEQPLSPRSWSLSFVSPTSFRHRGHHLPLPIPRNLFHSYLRRWNDFSGLPIEAEPFLDWVDGEVIIQRHRLESVKTTAG
RQGSVTGFIGCVQLAVSSRAPELLQQQLQALIHLAPYCGTGHKTPFGLGQTRLGWLAEELPASPVPSREEQVAQRIEELS
ALFLSQRQRQGGSRAEKTAQLWATILARREGGESLQQIAADLEMPYETVKTYAKLARRSLQSGSQDYSSSSLP

Specific function: Unknown

COG id: COG5551

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44452; Mature: 44452

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVAVDWEWAVPMLSFSEPSADREANGKWPTGSELVGITLEVQAPRSYLLDPHYAKGLH
CEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHCCCCHHHHHHH
AWFLSQVQETDPQLSAYLHDGESEKPFTLSRLMGPFREQGGRPLIPPHLPFRWWITGLNP
HHHHHHHHHCCHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCH
PVVEWLRGWCQRLPTWLELRGSPLQILGWQISIPPRTYRQLLEQPLSPRSWSLSFVSPTS
HHHHHHHHHHHHCCHHHHCCCCCEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCC
FRHRGHHLPLPIPRNLFHSYLRRWNDFSGLPIEAEPFLDWVDGEVIIQRHRLESVKTTAG
HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCC
RQGSVTGFIGCVQLAVSSRAPELLQQQLQALIHLAPYCGTGHKTPFGLGQTRLGWLAEEL
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHC
PASPVPSREEQVAQRIEELSALFLSQRQRQGGSRAEKTAQLWATILARREGGESLQQIAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
DLEMPYETVKTYAKLARRSLQSGSQDYSSSSLP
HHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLIVAVDWEWAVPMLSFSEPSADREANGKWPTGSELVGITLEVQAPRSYLLDPHYAKGLH
CEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHCCCCHHHHHHH
AWFLSQVQETDPQLSAYLHDGESEKPFTLSRLMGPFREQGGRPLIPPHLPFRWWITGLNP
HHHHHHHHHCCHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCH
PVVEWLRGWCQRLPTWLELRGSPLQILGWQISIPPRTYRQLLEQPLSPRSWSLSFVSPTS
HHHHHHHHHHHHCCHHHHCCCCCEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCC
FRHRGHHLPLPIPRNLFHSYLRRWNDFSGLPIEAEPFLDWVDGEVIIQRHRLESVKTTAG
HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCC
RQGSVTGFIGCVQLAVSSRAPELLQQQLQALIHLAPYCGTGHKTPFGLGQTRLGWLAEEL
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHC
PASPVPSREEQVAQRIEELSALFLSQRQRQGGSRAEKTAQLWATILARREGGESLQQIAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
DLEMPYETVKTYAKLARRSLQSGSQDYSSSSLP
HHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA