Click here to switch to the map view.

The map label for this gene is yoaR [H]

Identifier: 86608075

GI number: 86608075

Start: 590399

End: 591046

Strand: Direct

Name: yoaR [H]

Synonym: CYB_0584

Alternate gene names: 86608075

Gene position: 590399-591046 (Clockwise)

Preceding gene: 86608074

Following gene: 86608087

Centisome position: 19.38

GC content: 60.49

Gene sequence:

>648_bases
GTGGGGGCGCTACTGGCCCTTCTGGCCTTGTGGTGGACGGATCCCACGCCAACAACCCTAAGCCAATACGTTACTTCTTT
GCAGGAGCGCACTCCTTCTCAACTCCACAACATTCGCCGAGCCGTCCAAAGCCTGGATGGAGTTTACATCATGCCTGCGA
CACGCTCACAGGAACAGGCAGAAGTGATTTTTTCCTTCAACCAAGTGGTGGGGCCGCGCAGCCTGGAACGAGGCTATGTG
CCCGCGCCGGTGTTTATGGTGGCCGAAACCCTGGATTCGGTTGGGGGAGGAATCTGTCAGGTGTCCTCTAGCCTTTACAA
TGCCGCTCTGTTGGCAGGGCTGGAGGTGGTGGAGAGGCACCCCCATTACCGGCAGGTAGAGTCGGTGCCCCCTGGCTTAG
ATGCCACCGTTTGGTACGGCTTGGCCGACCTCAAGCTGCGCAACCCTTTCCCCTGGCCGGTGCGCCTACGAGTTCAGATC
CGCGGCCCAAACCTGATTGTGTCCGTGCTGGGACGGGGATCCCGCCACGCCCTGAGGATCCCACCCATCCGTGTAGAGGG
GCACCGGCTGGATCCCCAGCATTTGCAGGTGAGCGTGTATCGGGGTAACGAGCGCCTCTCCCAAGATCGCTATGTCGTTG
CTCCCTAG

Upstream 100 bases:

>100_bases
CTGCCCGCTCGCGCTACTCGGACGGAGTCCTTGAAACCCCTTCTGACGGGCAAGGTGTGAGGTGAGAGGAAGGGTTGACC
TGCGGAGGTTGGCTGTGCTG

Downstream 100 bases:

>100_bases
CCTCTCATCGCGCCAGCGGGACGGAGTCCTTTTTTCGCCCCATTGGCCCCCTACTTCAGCGTCTCAGGAGCAGCTCCCCA
GCAACCTCCACACAGGGATC

Product: VanW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MGALLALLALWWTDPTPTTLSQYVTSLQERTPSQLHNIRRAVQSLDGVYIMPATRSQEQAEVIFSFNQVVGPRSLERGYV
PAPVFMVAETLDSVGGGICQVSSSLYNAALLAGLEVVERHPHYRQVESVPPGLDATVWYGLADLKLRNPFPWPVRLRVQI
RGPNLIVSVLGRGSRHALRIPPIRVEGHRLDPQHLQVSVYRGNERLSQDRYVVAP

Sequences:

>Translated_215_residues
MGALLALLALWWTDPTPTTLSQYVTSLQERTPSQLHNIRRAVQSLDGVYIMPATRSQEQAEVIFSFNQVVGPRSLERGYV
PAPVFMVAETLDSVGGGICQVSSSLYNAALLAGLEVVERHPHYRQVESVPPGLDATVWYGLADLKLRNPFPWPVRLRVQI
RGPNLIVSVLGRGSRHALRIPPIRVEGHRLDPQHLQVSVYRGNERLSQDRYVVAP
>Mature_214_residues
GALLALLALWWTDPTPTTLSQYVTSLQERTPSQLHNIRRAVQSLDGVYIMPATRSQEQAEVIFSFNQVVGPRSLERGYVP
APVFMVAETLDSVGGGICQVSSSLYNAALLAGLEVVERHPHYRQVESVPPGLDATVWYGLADLKLRNPFPWPVRLRVQIR
GPNLIVSVLGRGSRHALRIPPIRVEGHRLDPQHLQVSVYRGNERLSQDRYVVAP

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 23975; Mature: 23844

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGALLALLALWWTDPTPTTLSQYVTSLQERTPSQLHNIRRAVQSLDGVYIMPATRSQEQA
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCHHHH
EVIFSFNQVVGPRSLERGYVPAPVFMVAETLDSVGGGICQVSSSLYNAALLAGLEVVERH
HHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
PHYRQVESVPPGLDATVWYGLADLKLRNPFPWPVRLRVQIRGPNLIVSVLGRGSRHALRI
CCHHHHHCCCCCCCHHEECCEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEC
PPIRVEGHRLDPQHLQVSVYRGNERLSQDRYVVAP
CCEEECCCCCCCCCEEEEEEECCCCCCCCCEEECC
>Mature Secondary Structure 
GALLALLALWWTDPTPTTLSQYVTSLQERTPSQLHNIRRAVQSLDGVYIMPATRSQEQA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCHHHH
EVIFSFNQVVGPRSLERGYVPAPVFMVAETLDSVGGGICQVSSSLYNAALLAGLEVVERH
HHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
PHYRQVESVPPGLDATVWYGLADLKLRNPFPWPVRLRVQIRGPNLIVSVLGRGSRHALRI
CCHHHHHCCCCCCCHHEECCEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEC
PPIRVEGHRLDPQHLQVSVYRGNERLSQDRYVVAP
CCEEECCCCCCCCCEEEEEEECCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]