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The map label for this gene is opuCC [H]

Identifier: 86608071

GI number: 86608071

Start: 586180

End: 587103

Strand: Direct

Name: opuCC [H]

Synonym: CYB_0579

Alternate gene names: 86608071

Gene position: 586180-587103 (Clockwise)

Preceding gene: 86608070

Following gene: 86608072

Centisome position: 19.24

GC content: 62.88

Gene sequence:

>924_bases
ATGCTGAAAACCACTCGTCGCTTGGCTTTGCTGGCCCTGTCGGGGCTGGCAGCTCTTGTTCTCACTCCCCATCGCGCCAG
CGGGACGGAGTCCTTAGGGGGCCTCGCCAAGCCCATTACCGTCGGCTCCAAGGACTTTACCGAGCAGTTTATTTTGGGGG
AAATGTACGCCTTAGCCCTGGAGGCGGCAGGGTTCACGGTGGAGCGCAAGCTCAACCTGGGGGGCACGCCGGTAGCCCAT
GCGGGCTTGTTGAGCGGCGAGATCGATCTCTACCCCGAGTACACCGGCACTGGCCTGCTGACAGTGCTCAAGTTGCCCAG
CAGCGGCGACCCGGCAGAGGTGTACGCGACGGTGGCCCGCGAGTACGAGAGCCAGTTCCAACTGATTTGGCTGGATCCCG
CCCCCCTGAACAACACCCAGGCCCTGGCCATGACCCGCGCCAGAGCGGCTGAGCTGGGCATTGCCACCATCTCGGACATG
GTGGCCAAAGCGGGCGAGCTGGTGATGATCGGGCCGCCGGAGTTTCAAGCCCGCGAGGATGGCCTACCCGGGATCCAAGC
CGTCTACGGTAATTTCCGGCTCAAGGCCTACAAAGCAGTGGATCCCGGCCTCCGCTACCAGGGCTTGGTCAATGGGGAAG
CGGATGTGGCAGTGGCCTTCGGCACCGATGGAGAAATTGCCGCCTTTGACCTGGTGCTGCTGGAGGATGACAAGCAGCTT
TTCCCCCCCTACCAGGTGGCGCCGGTGGTGCGCAAGGACACCCTGGAGGCCAACCCCGGCATTGCCGCTGCCTTAAATGC
CCTTTCCCCCCTGCTGACGGACGAGGTGATGCAGCGGTTGAACTACGAGGTGAGCGGCAACCGCAAGGAGCCGGCGGAGG
TGGCCAGAACTTTCTTGGTGGAAGCCGGCATTCTCAAGAAATAA

Upstream 100 bases:

>100_bases
GGTTTAATGGTGACTTAACAGTCGAAACTTCCTGGCCCAGGCCGGAACGCTCTCGGCAGGGCCTCTTGTCATTAGCCTGG
GATCCCTTCTCCCCTTGCCT

Downstream 100 bases:

>100_bases
CCTTGCCTGTTGCATGAGACCCTGAGGTGAGCACCGTCGAGTTCGAGCGGGTATCGCTGCGCTTTCCCCACAGTTCCCAG
CCGGCTGTGGAGGAGTGCAG

Product: quaternary amine ABC transporter periplasmic substrate-binding protein

Products: NA

Alternate protein names: Osmoprotectant-binding protein [H]

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLKTTRRLALLALSGLAALVLTPHRASGTESLGGLAKPITVGSKDFTEQFILGEMYALALEAAGFTVERKLNLGGTPVAH
AGLLSGEIDLYPEYTGTGLLTVLKLPSSGDPAEVYATVAREYESQFQLIWLDPAPLNNTQALAMTRARAAELGIATISDM
VAKAGELVMIGPPEFQAREDGLPGIQAVYGNFRLKAYKAVDPGLRYQGLVNGEADVAVAFGTDGEIAAFDLVLLEDDKQL
FPPYQVAPVVRKDTLEANPGIAAALNALSPLLTDEVMQRLNYEVSGNRKEPAEVARTFLVEAGILKK

Sequences:

>Translated_307_residues
MLKTTRRLALLALSGLAALVLTPHRASGTESLGGLAKPITVGSKDFTEQFILGEMYALALEAAGFTVERKLNLGGTPVAH
AGLLSGEIDLYPEYTGTGLLTVLKLPSSGDPAEVYATVAREYESQFQLIWLDPAPLNNTQALAMTRARAAELGIATISDM
VAKAGELVMIGPPEFQAREDGLPGIQAVYGNFRLKAYKAVDPGLRYQGLVNGEADVAVAFGTDGEIAAFDLVLLEDDKQL
FPPYQVAPVVRKDTLEANPGIAAALNALSPLLTDEVMQRLNYEVSGNRKEPAEVARTFLVEAGILKK
>Mature_307_residues
MLKTTRRLALLALSGLAALVLTPHRASGTESLGGLAKPITVGSKDFTEQFILGEMYALALEAAGFTVERKLNLGGTPVAH
AGLLSGEIDLYPEYTGTGLLTVLKLPSSGDPAEVYATVAREYESQFQLIWLDPAPLNNTQALAMTRARAAELGIATISDM
VAKAGELVMIGPPEFQAREDGLPGIQAVYGNFRLKAYKAVDPGLRYQGLVNGEADVAVAFGTDGEIAAFDLVLLEDDKQL
FPPYQVAPVVRKDTLEANPGIAAALNALSPLLTDEVMQRLNYEVSGNRKEPAEVARTFLVEAGILKK

Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine, and choline [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=286, Percent_Identity=31.8181818181818, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32726; Mature: 32726

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTTRRLALLALSGLAALVLTPHRASGTESLGGLAKPITVGSKDFTEQFILGEMYALAL
CCCCHHHHHHHHHHHHEEEEECCCCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHHHHH
EAAGFTVERKLNLGGTPVAHAGLLSGEIDLYPEYTGTGLLTVLKLPSSGDPAEVYATVAR
HHCCEEEEEEECCCCCCHHHHCEECCCEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHH
EYESQFQLIWLDPAPLNNTQALAMTRARAAELGIATISDMVAKAGELVMIGPPEFQARED
HHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
GLPGIQAVYGNFRLKAYKAVDPGLRYQGLVNGEADVAVAFGTDGEIAAFDLVLLEDDKQL
CCCCHHHHHCCEEEEEEECCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEEEEECCCCC
FPPYQVAPVVRKDTLEANPGIAAALNALSPLLTDEVMQRLNYEVSGNRKEPAEVARTFLV
CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHH
EAGILKK
HHCCCCC
>Mature Secondary Structure
MLKTTRRLALLALSGLAALVLTPHRASGTESLGGLAKPITVGSKDFTEQFILGEMYALAL
CCCCHHHHHHHHHHHHEEEEECCCCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHHHHH
EAAGFTVERKLNLGGTPVAHAGLLSGEIDLYPEYTGTGLLTVLKLPSSGDPAEVYATVAR
HHCCEEEEEEECCCCCCHHHHCEECCCEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHH
EYESQFQLIWLDPAPLNNTQALAMTRARAAELGIATISDMVAKAGELVMIGPPEFQARED
HHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
GLPGIQAVYGNFRLKAYKAVDPGLRYQGLVNGEADVAVAFGTDGEIAAFDLVLLEDDKQL
CCCCHHHHHCCEEEEEEECCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEEEEECCCCC
FPPYQVAPVVRKDTLEANPGIAAALNALSPLLTDEVMQRLNYEVSGNRKEPAEVARTFLV
CCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHH
EAGILKK
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]