Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is ywoG [H]
Identifier: 86608053
GI number: 86608053
Start: 570229
End: 571530
Strand: Direct
Name: ywoG [H]
Synonym: CYB_0561
Alternate gene names: 86608053
Gene position: 570229-571530 (Clockwise)
Preceding gene: 86608051
Following gene: 86608054
Centisome position: 18.72
GC content: 60.29
Gene sequence:
>1302_bases GTGAGGGTATTCGGGCAGCTGCAGCCGGCACAGCGGCGCAACTTGGGCATTTTGTTTGTGGCTGGGCTGCTCTTTTGGGC CAGTTTATCCTCGCTGCTGCCCACGTTGCCTCTCTACGTCAGAGATGCCGGTGGCACCAGCCAGCAAGTGGGCTGGGTAA TGGGGGCCTTTTCGATTGGGTTGCTGGCCTTTCGCCCTGCGTTGGGTCGCCTGGCGGATGGCCACAGCCGGCAGATCGTG CTGCTTATCGGCATGGGGGTGGTGGGGATGGCCCCCATAGGATACTGGCTCTCCGATTGGATCCCATGGGTAGCGCTGGT GCGAGCCTTTCATGGGGTTAGCATCGCCGCTTTTGCCACGGCCTATGTGACTTTGGTGGTGGATTTTGCCCCAGAAGAAA AACGGGGTGAGATCCTGGGCTACATGAGTTTGGTCAATCCGATCGGCGCAGCCATTGGCCCTGCTTTGGGCGGCTTTTTG CAGGAGTTTGCCGGCTATGGCCCTTCGTTTCTCTTCTCTGCTCTGCTGGGGTTGGTGGGCTTTCTTTGTACCCAACTGGT TCGAGAACAGCGGCGTGAGCATTGGGGATCCCTGCCGATGGATGGGGCCTTCTGGAGCTTTCTGGGCAGCCCGAAGGTGC GCTCCCTCGCTTGGGTGATGTTTTTGGTGGGGTTGGCCTTCGGCACCCAGACCACCTTTGTGGCCTTGTTAATCCAAGAA GCCGGAGCTCCCCTGAATCCAGGTCTTTTTTATACGGCAGTGGCCTTTGCCAGCTTTGGAGTGCGCCTGCTCACCGGTCG CGCTTCCGATCGCTATGGGCGGGGGCCGTTTATCTCCCTCAGCTTGGTCACCTATGCCCTGGCGATGGGGATCCTGATTG TTGCCAATAGCAGCGGCGCTTTTCTGGCTGCTGGGGTCGCGGTAGGCTGCGGTTTTGGGACTTTGATCCCTCTCATTTCT GCCCTCGTGGCCGATCGCTCGGAGCCGGCGGAGCGGGGTCGCCTGTTTAGCTTGGTGATGTGCGGGTTTGATTTGGGCAT TGGCCTGGCGGGGCCCCTTTTGGGCACCTTAGCAGCGGGATCCGGCTATCGAGCCATGTTTGGCTATGCGGCTCTTCTTT CCTTGGCTTCCTTGGGTTCTTTTCTCTTCTTCTCCAATGGACGACCGGGGGACTCGCTGCGCTTTGCCTTGGGCCTGGGG CCGGATAGCCTTTCGGGTTGTCTGGAGGACAGCCGCAACCCGACCTCCTGGAGCCACCGGGTCAGCCCGCTCCCCCGGAG ACGGGATCCCGTTCATAGATAG
Upstream 100 bases:
>100_bases ACCTAAATATTTCGGGCTGAGGGATCCGGCGAAGGTGGGCTTATCCTAGGGCGCGGTTCTGGGAGAACGCTTTGAGTTCC ATTTTGCATAAGGAGTTGGC
Downstream 100 bases:
>100_bases TCTCATATCTCTATCAGATCCCCCCTGCTCCACACCTGATCCACACCTGAATTGAGACTCAAGCCCTCTGCAGTTTCTAC AGACAAACCGGCCCATTTCT
Product: drug:H+ antiporter-1 family protein
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MRVFGQLQPAQRRNLGILFVAGLLFWASLSSLLPTLPLYVRDAGGTSQQVGWVMGAFSIGLLAFRPALGRLADGHSRQIV LLIGMGVVGMAPIGYWLSDWIPWVALVRAFHGVSIAAFATAYVTLVVDFAPEEKRGEILGYMSLVNPIGAAIGPALGGFL QEFAGYGPSFLFSALLGLVGFLCTQLVREQRREHWGSLPMDGAFWSFLGSPKVRSLAWVMFLVGLAFGTQTTFVALLIQE AGAPLNPGLFYTAVAFASFGVRLLTGRASDRYGRGPFISLSLVTYALAMGILIVANSSGAFLAAGVAVGCGFGTLIPLIS ALVADRSEPAERGRLFSLVMCGFDLGIGLAGPLLGTLAAGSGYRAMFGYAALLSLASLGSFLFFSNGRPGDSLRFALGLG PDSLSGCLEDSRNPTSWSHRVSPLPRRRDPVHR
Sequences:
>Translated_433_residues MRVFGQLQPAQRRNLGILFVAGLLFWASLSSLLPTLPLYVRDAGGTSQQVGWVMGAFSIGLLAFRPALGRLADGHSRQIV LLIGMGVVGMAPIGYWLSDWIPWVALVRAFHGVSIAAFATAYVTLVVDFAPEEKRGEILGYMSLVNPIGAAIGPALGGFL QEFAGYGPSFLFSALLGLVGFLCTQLVREQRREHWGSLPMDGAFWSFLGSPKVRSLAWVMFLVGLAFGTQTTFVALLIQE AGAPLNPGLFYTAVAFASFGVRLLTGRASDRYGRGPFISLSLVTYALAMGILIVANSSGAFLAAGVAVGCGFGTLIPLIS ALVADRSEPAERGRLFSLVMCGFDLGIGLAGPLLGTLAAGSGYRAMFGYAALLSLASLGSFLFFSNGRPGDSLRFALGLG PDSLSGCLEDSRNPTSWSHRVSPLPRRRDPVHR >Mature_433_residues MRVFGQLQPAQRRNLGILFVAGLLFWASLSSLLPTLPLYVRDAGGTSQQVGWVMGAFSIGLLAFRPALGRLADGHSRQIV LLIGMGVVGMAPIGYWLSDWIPWVALVRAFHGVSIAAFATAYVTLVVDFAPEEKRGEILGYMSLVNPIGAAIGPALGGFL QEFAGYGPSFLFSALLGLVGFLCTQLVREQRREHWGSLPMDGAFWSFLGSPKVRSLAWVMFLVGLAFGTQTTFVALLIQE AGAPLNPGLFYTAVAFASFGVRLLTGRASDRYGRGPFISLSLVTYALAMGILIVANSSGAFLAAGVAVGCGFGTLIPLIS ALVADRSEPAERGRLFSLVMCGFDLGIGLAGPLLGTLAAGSGYRAMFGYAALLSLASLGSFLFFSNGRPGDSLRFALGLG PDSLSGCLEDSRNPTSWSHRVSPLPRRRDPVHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1787291, Length=376, Percent_Identity=28.4574468085106, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45932; Mature: 45932
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVFGQLQPAQRRNLGILFVAGLLFWASLSSLLPTLPLYVRDAGGTSQQVGWVMGAFSIG CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH LLAFRPALGRLADGHSRQIVLLIGMGVVGMAPIGYWLSDWIPWVALVRAFHGVSIAAFAT HHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AYVTLVVDFAPEEKRGEILGYMSLVNPIGAAIGPALGGFLQEFAGYGPSFLFSALLGLVG HHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FLCTQLVREQRREHWGSLPMDGAFWSFLGSPKVRSLAWVMFLVGLAFGTQTTFVALLIQE HHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH AGAPLNPGLFYTAVAFASFGVRLLTGRASDRYGRGPFISLSLVTYALAMGILIVANSSGA CCCCCCCCHHHHHHHHHHCCHHEEECCCCCCCCCCCEEHHHHHHHHHHHHEEEEECCCCC FLAAGVAVGCGFGTLIPLISALVADRSEPAERGRLFSLVMCGFDLGIGLAGPLLGTLAAG CHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC SGYRAMFGYAALLSLASLGSFLFFSNGRPGDSLRFALGLGPDSLSGCLEDSRNPTSWSHR CCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCC VSPLPRRRDPVHR CCCCCCCCCCCCC >Mature Secondary Structure MRVFGQLQPAQRRNLGILFVAGLLFWASLSSLLPTLPLYVRDAGGTSQQVGWVMGAFSIG CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH LLAFRPALGRLADGHSRQIVLLIGMGVVGMAPIGYWLSDWIPWVALVRAFHGVSIAAFAT HHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AYVTLVVDFAPEEKRGEILGYMSLVNPIGAAIGPALGGFLQEFAGYGPSFLFSALLGLVG HHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FLCTQLVREQRREHWGSLPMDGAFWSFLGSPKVRSLAWVMFLVGLAFGTQTTFVALLIQE HHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH AGAPLNPGLFYTAVAFASFGVRLLTGRASDRYGRGPFISLSLVTYALAMGILIVANSSGA CCCCCCCCHHHHHHHHHHCCHHEEECCCCCCCCCCCEEHHHHHHHHHHHHEEEEECCCCC FLAAGVAVGCGFGTLIPLISALVADRSEPAERGRLFSLVMCGFDLGIGLAGPLLGTLAAG CHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC SGYRAMFGYAALLSLASLGSFLFFSNGRPGDSLRFALGLGPDSLSGCLEDSRNPTSWSHR CCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCC VSPLPRRRDPVHR CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]