Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
---|---|
Accession | NC_007776 |
Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86608048
Identifier: 86608048
GI number: 86608048
Start: 566647
End: 567753
Strand: Direct
Name: 86608048
Synonym: CYB_0556
Alternate gene names: NA
Gene position: 566647-567753 (Clockwise)
Preceding gene: 86608042
Following gene: 86608051
Centisome position: 18.6
GC content: 61.88
Gene sequence:
>1107_bases ATGTACACCGGCACCGCCGCCGGGGAAGTGGTGGGCTTGTCGGATCGCATTTGCCAGGCTTTGCCAGGGTTTGTGCGGGA GCCGGATCGGCGCAATGTGGAGTACATCACCCCCCCTCTCCGCCGCTACGAAGACCTGCTCTGCGCTCTGCTGCGACCTC GCCTGCAGTTGCGGCAATTTTTGCGCCGTCTTGGCCCTTACACCCTTCTGCCAGGGAGTACGCTGGCTTTGGGCGGCAGC GATCACTTCGAGCGGTCGGATCCCGGCAACCCCTACCACGACTACATCGAGCGCACCTATGGCACGCGGGTGGTAACTGC TAGCATTCACATCAATGTTGGCCTGCCAGGTACCGAGGCCATCTTCCGGGCCTGTCGCCTGCTGCGAGCGGAAGCATCTC TCTACCTAGCTCTGAGCGCTTCCTCTCCTTTTCTGGACGGACGGGTGACGGGATCCCATTCCAGCCGTTGGCAGGTGTTC CCCAAAACGCCGGCTCAGGTGCCCTTCTTCCGGGATCACGCCCACTACATTGCCTGGATCCAGGAGCAGCTAGCCTTGGG CACCATGCAGAATGTGCGCCACCTGTGGGCCTCGGTGCGACCCAACGGCCCGGAGCGGCCCTACCACCTCAACCGCGTGG AGCTGCGCATTTGCGATCTGGTGGGGGATCCGGTAATGGTTCTGGCCATTACCGCCTTGGTGGAAGCCCGTCTCTGGCAG TTGCTGGCCCAGCCGGAAGCGCTGGATCCCTTGCGGGGGCCCTTTACCCCAACAGAGCTGGAGAGCCTTTGCGAAGCCAA CGAGCAGGCTGCTGCTCGAGAATCGCTGCAATCTCATTTGGTCGATTGGCGGACAGGCCGGGAACGGGCGGCCCAAGAGT GGATCGAAGAGCTGCTGACCGAAGCTTGGCGTATTGGCCAACCTCAAGGCTTGGGCTGTTTTCTAGCTCCCTTGCAAACT CTGCTCCACCAGGGCAATGAGGCCCAACGCTGGCTGAAGCAAGTCAACCAGGGATCCACACCTGCCCAGGTGTACCAACA GGCCATCCAGGAGCTGGCCGAACAAGACCGAGAGAGGCAGGAAACCCTCTGTCAAGCTGTCGGCTAA
Upstream 100 bases:
>100_bases GCCAAACCCCAGGACAATGAGGGGAGAAGAGAAAGGTTAGACTGGTGAGGCTGCGGCTGGAGGCTGGCCTGTGCTGTTAA CCAAGGGCTTTGAGGTGGAA
Downstream 100 bases:
>100_bases GCCTCTGCCCAACGGTGAGCGTTCTCAACCCGGTGCTTTCTACACACTAGCTCGCCGAGCCAACTTATAGTCATTTCAAA CTGGATTGAGACACTCCTAC
Product: glutamate--cysteine ligase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MYTGTAAGEVVGLSDRICQALPGFVREPDRRNVEYITPPLRRYEDLLCALLRPRLQLRQFLRRLGPYTLLPGSTLALGGS DHFERSDPGNPYHDYIERTYGTRVVTASIHINVGLPGTEAIFRACRLLRAEASLYLALSASSPFLDGRVTGSHSSRWQVF PKTPAQVPFFRDHAHYIAWIQEQLALGTMQNVRHLWASVRPNGPERPYHLNRVELRICDLVGDPVMVLAITALVEARLWQ LLAQPEALDPLRGPFTPTELESLCEANEQAAARESLQSHLVDWRTGRERAAQEWIEELLTEAWRIGQPQGLGCFLAPLQT LLHQGNEAQRWLKQVNQGSTPAQVYQQAIQELAEQDRERQETLCQAVG
Sequences:
>Translated_368_residues MYTGTAAGEVVGLSDRICQALPGFVREPDRRNVEYITPPLRRYEDLLCALLRPRLQLRQFLRRLGPYTLLPGSTLALGGS DHFERSDPGNPYHDYIERTYGTRVVTASIHINVGLPGTEAIFRACRLLRAEASLYLALSASSPFLDGRVTGSHSSRWQVF PKTPAQVPFFRDHAHYIAWIQEQLALGTMQNVRHLWASVRPNGPERPYHLNRVELRICDLVGDPVMVLAITALVEARLWQ LLAQPEALDPLRGPFTPTELESLCEANEQAAARESLQSHLVDWRTGRERAAQEWIEELLTEAWRIGQPQGLGCFLAPLQT LLHQGNEAQRWLKQVNQGSTPAQVYQQAIQELAEQDRERQETLCQAVG >Mature_368_residues MYTGTAAGEVVGLSDRICQALPGFVREPDRRNVEYITPPLRRYEDLLCALLRPRLQLRQFLRRLGPYTLLPGSTLALGGS DHFERSDPGNPYHDYIERTYGTRVVTASIHINVGLPGTEAIFRACRLLRAEASLYLALSASSPFLDGRVTGSHSSRWQVF PKTPAQVPFFRDHAHYIAWIQEQLALGTMQNVRHLWASVRPNGPERPYHLNRVELRICDLVGDPVMVLAITALVEARLWQ LLAQPEALDPLRGPFTPTELESLCEANEQAAARESLQSHLVDWRTGRERAAQEWIEELLTEAWRIGQPQGLGCFLAPLQT LLHQGNEAQRWLKQVNQGSTPAQVYQQAIQELAEQDRERQETLCQAVG
Specific function: ATP-dependent carboxylate-amine ligase [H]
COG id: COG2170
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carboxylate-amine ligase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011793 - InterPro: IPR006336 [H]
Pfam domain/function: PF04107 GCS2 [H]
EC number: NA
Molecular weight: Translated: 41525; Mature: 41525
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTGTAAGEVVGLSDRICQALPGFVREPDRRNVEYITPPLRRYEDLLCALLRPRLQLRQF CCCCCCCCCEECCHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LRRLGPYTLLPGSTLALGGSDHFERSDPGNPYHDYIERTYGTRVVTASIHINVGLPGTEA HHHHCCEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEEECCCCHHH IFRACRLLRAEASLYLALSASSPFLDGRVTGSHSSRWQVFPKTPAQVPFFRDHAHYIAWI HHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHH QEQLALGTMQNVRHLWASVRPNGPERPYHLNRVELRICDLVGDPVMVLAITALVEARLWQ HHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LLAQPEALDPLRGPFTPTELESLCEANEQAAARESLQSHLVDWRTGRERAAQEWIEELLT HHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH EAWRIGQPQGLGCFLAPLQTLLHQGNEAQRWLKQVNQGSTPAQVYQQAIQELAEQDRERQ HHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ETLCQAVG HHHHHHCC >Mature Secondary Structure MYTGTAAGEVVGLSDRICQALPGFVREPDRRNVEYITPPLRRYEDLLCALLRPRLQLRQF CCCCCCCCCEECCHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LRRLGPYTLLPGSTLALGGSDHFERSDPGNPYHDYIERTYGTRVVTASIHINVGLPGTEA HHHHCCEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEEECCCCHHH IFRACRLLRAEASLYLALSASSPFLDGRVTGSHSSRWQVFPKTPAQVPFFRDHAHYIAWI HHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHH QEQLALGTMQNVRHLWASVRPNGPERPYHLNRVELRICDLVGDPVMVLAITALVEARLWQ HHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LLAQPEALDPLRGPFTPTELESLCEANEQAAARESLQSHLVDWRTGRERAAQEWIEELLT HHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH EAWRIGQPQGLGCFLAPLQTLLHQGNEAQRWLKQVNQGSTPAQVYQQAIQELAEQDRERQ HHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ETLCQAVG HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14621292 [H]