| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ltaE [H]
Identifier: 86608032
GI number: 86608032
Start: 555082
End: 556122
Strand: Direct
Name: ltaE [H]
Synonym: CYB_0540
Alternate gene names: 86608032
Gene position: 555082-556122 (Clockwise)
Preceding gene: 86608031
Following gene: 86608035
Centisome position: 18.22
GC content: 60.04
Gene sequence:
>1041_bases ATGAACTTTTGCAGCGACAATGTTACAGGCGCTTGTCCTGAGGTGATGGAAGCCCTGTTGGCCCTCAACCGGGGATCCGC CATGCCCTATGGAGGGGACGAATGCACAGCGCAGGTGCAAAGGCTGTTTGCCGAGATCTTCGAGCATGAAGTGGCAGTGT TTCCGGTGGCAACAGGATCTGCTGCCAATGCCCTGGCCCTTTCGGTGCTCACCCCGCCCTACGGGGCGATTTATTGCCAT CCCGAGGCCCACATCAATCTGGACGAATGTGGAGCGCCAGAGCTGTTTACAGGTGGGGCCAAGTTGGTGGGGATCCCCGG AGAGCAAGGCCGTATCGACTGGGGCAACTTAAAAGCAGCCCTGGAGCGGGCGGGGTTTGGGGTGGTTCATCACGTGCAGC CTGCCTGCCTCAGCCTGACGCAAGCCACTGAGGCCGGCACCCTCTACTCCTTGGAGCAGCTTGGATCCCTGGCGGATTTG GCCCATCACTTTGGCCTCAAGGTGCATATGGATGGGGCTCGCTTCGCCAACGCCTTGGTCGGTTTGGGCTGCACCCCTGC CGAGATGACCTGGAAAGCGGGGGTGGATGTGCTGTCCTTTGGGGCCACCAAAAATGGGGCCTGGGCTGCGGAAGCGGTGG TGTTTTTTCATCCAGATCAGGTGGGCGATTTTGAGTTTCGTCGCAAGCGCAGTGGCCATCTGGTTTCGAAGATGCGCTTT TTGTCTGCCCAATTGCAGGCCTATCTCCAGGATGGGGTGTGGCTGCGCAATGCCCGCCATGCCAACGCGATGGCCCAACG GTTGGCCCAGGGACTGGGATCCCTGCCGGGAGCCAGGTTGGTATATCCCACCGAGGCCAATGAGGTTTTTATCGAGCTGC CGGAGCCGGTTCTCCAGGCCCTGGAGCAGGCGGGGTTTCGGTTTTACCGCTGGCTGGGGGAAGGTCACCACTTAATCCGC CTGGTGACGGCTTTTAACACTTTGCCCGCAGATGTCGAGCGCTTCTGCCAGGTGGCTCAGCAAGCCAGCCGTTTGCAATA G
Upstream 100 bases:
>100_bases GCAGGTCGGGACTGGGATACTTTGGAGGATCCCGGTTGGGTTGGCGCGAAGTAAGCCGGCCCTAACCCTTCCTCGGCGAG ATCCCCCAGTTGTCCAGGCC
Downstream 100 bases:
>100_bases GCGGACGGAGTCCTTGCAGCTGACCGGGGATCCCCCTGGCCAAAGGCCTGAGCATCCCAAGGGATCCCTGAAGGCTGTTC ATCGGCTGGTCAATCCTTAA
Product: low specificity L-threonine aldolase
Products: NA
Alternate protein names: Low specificity L-TA [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MNFCSDNVTGACPEVMEALLALNRGSAMPYGGDECTAQVQRLFAEIFEHEVAVFPVATGSAANALALSVLTPPYGAIYCH PEAHINLDECGAPELFTGGAKLVGIPGEQGRIDWGNLKAALERAGFGVVHHVQPACLSLTQATEAGTLYSLEQLGSLADL AHHFGLKVHMDGARFANALVGLGCTPAEMTWKAGVDVLSFGATKNGAWAAEAVVFFHPDQVGDFEFRRKRSGHLVSKMRF LSAQLQAYLQDGVWLRNARHANAMAQRLAQGLGSLPGARLVYPTEANEVFIELPEPVLQALEQAGFRFYRWLGEGHHLIR LVTAFNTLPADVERFCQVAQQASRLQ
Sequences:
>Translated_346_residues MNFCSDNVTGACPEVMEALLALNRGSAMPYGGDECTAQVQRLFAEIFEHEVAVFPVATGSAANALALSVLTPPYGAIYCH PEAHINLDECGAPELFTGGAKLVGIPGEQGRIDWGNLKAALERAGFGVVHHVQPACLSLTQATEAGTLYSLEQLGSLADL AHHFGLKVHMDGARFANALVGLGCTPAEMTWKAGVDVLSFGATKNGAWAAEAVVFFHPDQVGDFEFRRKRSGHLVSKMRF LSAQLQAYLQDGVWLRNARHANAMAQRLAQGLGSLPGARLVYPTEANEVFIELPEPVLQALEQAGFRFYRWLGEGHHLIR LVTAFNTLPADVERFCQVAQQASRLQ >Mature_346_residues MNFCSDNVTGACPEVMEALLALNRGSAMPYGGDECTAQVQRLFAEIFEHEVAVFPVATGSAANALALSVLTPPYGAIYCH PEAHINLDECGAPELFTGGAKLVGIPGEQGRIDWGNLKAALERAGFGVVHHVQPACLSLTQATEAGTLYSLEQLGSLADL AHHFGLKVHMDGARFANALVGLGCTPAEMTWKAGVDVLSFGATKNGAWAAEAVVFFHPDQVGDFEFRRKRSGHLVSKMRF LSAQLQAYLQDGVWLRNARHANAMAQRLAQGLGSLPGARLVYPTEANEVFIELPEPVLQALEQAGFRFYRWLGEGHHLIR LVTAFNTLPADVERFCQVAQQASRLQ
Specific function: Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde. Can also act on L-erythro- phenylserine, L-threo-phenylserine, L-beta-3,4- methylenedioxyphenylserine and L-beta-3,4-dihydroxyphenylserine [H]
COG id: COG2008
COG function: function code E; Threonine aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine aldolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001597 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01212 Beta_elim_lyase [H]
EC number: =4.1.2.5 [H]
Molecular weight: Translated: 37397; Mature: 37397
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFCSDNVTGACPEVMEALLALNRGSAMPYGGDECTAQVQRLFAEIFEHEVAVFPVATGS CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCC AANALALSVLTPPYGAIYCHPEAHINLDECGAPELFTGGAKLVGIPGEQGRIDWGNLKAA CCCCEEEEEECCCCCEEEECCCCCCCHHHCCCCCEECCCEEEEECCCCCCCCCHHHHHHH LERAGFGVVHHVQPACLSLTQATEAGTLYSLEQLGSLADLAHHFGLKVHMDGARFANALV HHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHH GLGCTPAEMTWKAGVDVLSFGATKNGAWAAEAVVFFHPDQVGDFEFRRKRSGHLVSKMRF CCCCCCHHHHHHCCCCEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCHHHHHHHH LSAQLQAYLQDGVWLRNARHANAMAQRLAQGLGSLPGARLVYPTEANEVFIELPEPVLQA HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCHHHHHH LEQAGFRFYRWLGEGHHLIRLVTAFNTLPADVERFCQVAQQASRLQ HHHCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNFCSDNVTGACPEVMEALLALNRGSAMPYGGDECTAQVQRLFAEIFEHEVAVFPVATGS CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCC AANALALSVLTPPYGAIYCHPEAHINLDECGAPELFTGGAKLVGIPGEQGRIDWGNLKAA CCCCEEEEEECCCCCEEEECCCCCCCHHHCCCCCEECCCEEEEECCCCCCCCCHHHHHHH LERAGFGVVHHVQPACLSLTQATEAGTLYSLEQLGSLADLAHHFGLKVHMDGARFANALV HHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHH GLGCTPAEMTWKAGVDVLSFGATKNGAWAAEAVVFFHPDQVGDFEFRRKRSGHLVSKMRF CCCCCCHHHHHHCCCCEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCHHHHHHHH LSAQLQAYLQDGVWLRNARHANAMAQRLAQGLGSLPGARLVYPTEANEVFIELPEPVLQA HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCHHHHHH LEQAGFRFYRWLGEGHHLIRLVTAFNTLPADVERFCQVAQQASRLQ HHHCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9464392 [H]