Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608031
Identifier: 86608031
GI number: 86608031
Start: 553989
End: 555035
Strand: Direct
Name: 86608031
Synonym: CYB_0539
Alternate gene names: NA
Gene position: 553989-555035 (Clockwise)
Preceding gene: 86608029
Following gene: 86608032
Centisome position: 18.18
GC content: 59.6
Gene sequence:
>1047_bases ATGCGTTGGTTCTCGTCCTCTGGTGTTCTCGTCAGCCTGCCTTTCCAGTCTTCTGTTGGGCGAAGTGTTCTGCCCCTGTC TGGCTCGATTTGGCAGCGGCTGGAGGCCTTAGCTCTGGGTTTGCACATTCTGTCTTTGCTTTTTGGGTTGGCAGGGTTGC TCTGGGTTGTACCCCATCCTGAGTGGGTGGCCAGTTTGCCCCCCATTGGCATTCAAGCTTTCTCCTTGAGCATGGGCAAT GGCGGCGTGGCCTACATGGTGTTCGGTGCGCTGGCGGCAGCTCTGATGGGATCCCGGCTGTTGGGGGTGCGGCGCCTATT GATGTTTTTGATCCCGGCGGTGGGCATTTCCTTGGGCAGTGAGCTGTTGGGTACCAGCACTGGGATCCCCTTTGGCAACT ATGGCTACCTGAGTGGGCTGGGCTACAAGATTGCCGGTTTGGTGCCTTTTACCATCCCTCTGTCTTGGTTTTATGTGGGG TTGTCATCCTACTTGTTGGCGCGTGTGGCTCTGCAAACCCAGCGCCACTGGTTGATCCACTTCGAGGCCATCATGTTGGG GGCCCTGCTGCTCACCGCCTGGGACTTCGTGCTGGATCCGGCCATGACCCGCGGCTTGATTCCCTTCTGGACGTGGTTTC AGCCGGGGCCCTTCTTCGGTATGCCGCTGCAAAACTTCGGTGGTTGGATGCTGACTGGGGCTGCCTTCATGACGGTGGCC AATCTGCTGTGGGGCGAGGATCAACCCATCCTTGACCGCCGCCAGTTGGTGGGGCCGCTGGTGCTCTATGTAGCTAATTT TGCTTTTGCCCTGCTGATGAGCCTGGGCTCCGGCATTGCTGCGCCGGCGGGGCTGGGCCTGTTGTTGGGGTTGGGGCCCG CTTTGGGGTTGTGGTGGAGTGCAGAGACTCCATCCCCCTATCGCGACCAGCCTGTGCCGCCTTCCCATCCTGAACAGGAC TCCATCCCGCTATTGCAAACGGTCGAGGGAGAGGCAGGTCGGGACTGGGATACTTTGGAGGATCCCGGTTGGGTTGGCGC GAAGTAA
Upstream 100 bases:
>100_bases TTTAGGCTCTCTCTTGGGGCCATCCGCTTTTTCCCTCAGCCGCCGTATGGGTTGCAAGGAGACAGAGCGGCTTCGCTTAA CCACTCTTCGGGAGTTTCTC
Downstream 100 bases:
>100_bases GCCGGCCCTAACCCTTCCTCGGCGAGATCCCCCAGTTGTCCAGGCCATGAACTTTTGCAGCGACAATGTTACAGGCGCTT GTCCTGAGGTGATGGAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MRWFSSSGVLVSLPFQSSVGRSVLPLSGSIWQRLEALALGLHILSLLFGLAGLLWVVPHPEWVASLPPIGIQAFSLSMGN GGVAYMVFGALAAALMGSRLLGVRRLLMFLIPAVGISLGSELLGTSTGIPFGNYGYLSGLGYKIAGLVPFTIPLSWFYVG LSSYLLARVALQTQRHWLIHFEAIMLGALLLTAWDFVLDPAMTRGLIPFWTWFQPGPFFGMPLQNFGGWMLTGAAFMTVA NLLWGEDQPILDRRQLVGPLVLYVANFAFALLMSLGSGIAAPAGLGLLLGLGPALGLWWSAETPSPYRDQPVPPSHPEQD SIPLLQTVEGEAGRDWDTLEDPGWVGAK
Sequences:
>Translated_348_residues MRWFSSSGVLVSLPFQSSVGRSVLPLSGSIWQRLEALALGLHILSLLFGLAGLLWVVPHPEWVASLPPIGIQAFSLSMGN GGVAYMVFGALAAALMGSRLLGVRRLLMFLIPAVGISLGSELLGTSTGIPFGNYGYLSGLGYKIAGLVPFTIPLSWFYVG LSSYLLARVALQTQRHWLIHFEAIMLGALLLTAWDFVLDPAMTRGLIPFWTWFQPGPFFGMPLQNFGGWMLTGAAFMTVA NLLWGEDQPILDRRQLVGPLVLYVANFAFALLMSLGSGIAAPAGLGLLLGLGPALGLWWSAETPSPYRDQPVPPSHPEQD SIPLLQTVEGEAGRDWDTLEDPGWVGAK >Mature_348_residues MRWFSSSGVLVSLPFQSSVGRSVLPLSGSIWQRLEALALGLHILSLLFGLAGLLWVVPHPEWVASLPPIGIQAFSLSMGN GGVAYMVFGALAAALMGSRLLGVRRLLMFLIPAVGISLGSELLGTSTGIPFGNYGYLSGLGYKIAGLVPFTIPLSWFYVG LSSYLLARVALQTQRHWLIHFEAIMLGALLLTAWDFVLDPAMTRGLIPFWTWFQPGPFFGMPLQNFGGWMLTGAAFMTVA NLLWGEDQPILDRRQLVGPLVLYVANFAFALLMSLGSGIAAPAGLGLLLGLGPALGLWWSAETPSPYRDQPVPPSHPEQD SIPLLQTVEGEAGRDWDTLEDPGWVGAK
Specific function: Unknown
COG id: COG2324
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37501; Mature: 37501
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWFSSSGVLVSLPFQSSVGRSVLPLSGSIWQRLEALALGLHILSLLFGLAGLLWVVPHP CCEECCCCEEEEECCHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EWVASLPPIGIQAFSLSMGNGGVAYMVFGALAAALMGSRLLGVRRLLMFLIPAVGISLGS HHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLGTSTGIPFGNYGYLSGLGYKIAGLVPFTIPLSWFYVGLSSYLLARVALQTQRHWLIH HHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEAIMLGALLLTAWDFVLDPAMTRGLIPFWTWFQPGPFFGMPLQNFGGWMLTGAAFMTVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHH NLLWGEDQPILDRRQLVGPLVLYVANFAFALLMSLGSGIAAPAGLGLLLGLGPALGLWWS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCEEEC AETPSPYRDQPVPPSHPEQDSIPLLQTVEGEAGRDWDTLEDPGWVGAK CCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRWFSSSGVLVSLPFQSSVGRSVLPLSGSIWQRLEALALGLHILSLLFGLAGLLWVVPHP CCEECCCCEEEEECCHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EWVASLPPIGIQAFSLSMGNGGVAYMVFGALAAALMGSRLLGVRRLLMFLIPAVGISLGS HHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLGTSTGIPFGNYGYLSGLGYKIAGLVPFTIPLSWFYVGLSSYLLARVALQTQRHWLIH HHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEAIMLGALLLTAWDFVLDPAMTRGLIPFWTWFQPGPFFGMPLQNFGGWMLTGAAFMTVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHH NLLWGEDQPILDRRQLVGPLVLYVANFAFALLMSLGSGIAAPAGLGLLLGLGPALGLWWS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCEEEC AETPSPYRDQPVPPSHPEQDSIPLLQTVEGEAGRDWDTLEDPGWVGAK CCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA