Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608018
Identifier: 86608018
GI number: 86608018
Start: 540238
End: 540549
Strand: Direct
Name: 86608018
Synonym: CYB_0525
Alternate gene names: NA
Gene position: 540238-540549 (Clockwise)
Preceding gene: 86608014
Following gene: 86608019
Centisome position: 17.73
GC content: 57.37
Gene sequence:
>312_bases ATGGGATCAAAGGTTGTTTGTCGGCCAGCAGGGAGGGCAGAAGCGGTGCAGCTCGGTTTAACGGAACGGGAACTGACAGA GTTGGCCCAAAAGTCGGTTCAGCTCATCCTCAGCCCGCGGGAAGGGGATAGCGAAGCGCTGATCCAGTACAAGTCTTCGG CAGAATTTCGAGCGGGGGTGCATCTGGCCTGTGCGGCCATGGTGTTGGTCTTGGCAGAGAACAACGAGCGCCTCAGCCAG CAGTTGCAGGCTACTTTACAAAACTTATCTGCAGCCGTCGAGACACCCTCAGAGAAGGCTGCCGGAAGCTAG
Upstream 100 bases:
>100_bases TCTCCTTCTAGAGCTATCAAGAGTTGTCAAGGCCCGCTCACTTGGGGATCCTGCCAGATTGGGGCAACAACCGCGGTAGG ATACCAAAGTGGCGATCCTG
Downstream 100 bases:
>100_bases CCCAAGGATCCGCGAACGGGGGAGGAAAAGCCTTGGCTGAGGTGCGCAGCGAACGAGACTCAATGGGGGAGCGGCAACTA CCCCAGTCGGTTTACTACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MGSKVVCRPAGRAEAVQLGLTERELTELAQKSVQLILSPREGDSEALIQYKSSAEFRAGVHLACAAMVLVLAENNERLSQ QLQATLQNLSAAVETPSEKAAGS
Sequences:
>Translated_103_residues MGSKVVCRPAGRAEAVQLGLTERELTELAQKSVQLILSPREGDSEALIQYKSSAEFRAGVHLACAAMVLVLAENNERLSQ QLQATLQNLSAAVETPSEKAAGS >Mature_102_residues GSKVVCRPAGRAEAVQLGLTERELTELAQKSVQLILSPREGDSEALIQYKSSAEFRAGVHLACAAMVLVLAENNERLSQQ LQATLQNLSAAVETPSEKAAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10937; Mature: 10805
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSKVVCRPAGRAEAVQLGLTERELTELAQKSVQLILSPREGDSEALIQYKSSAEFRAGV CCCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHEEECCCCCCHHHHEEECCCCCHHHHH HLACAAMVLVLAENNERLSQQLQATLQNLSAAVETPSEKAAGS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GSKVVCRPAGRAEAVQLGLTERELTELAQKSVQLILSPREGDSEALIQYKSSAEFRAGV CCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHEEECCCCCCHHHHEEECCCCCHHHHH HLACAAMVLVLAENNERLSQQLQATLQNLSAAVETPSEKAAGS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA