| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607727
Identifier: 86607727
GI number: 86607727
Start: 237598
End: 238200
Strand: Reverse
Name: 86607727
Synonym: CYB_0228
Alternate gene names: NA
Gene position: 238200-237598 (Counterclockwise)
Preceding gene: 86607732
Following gene: 86607723
Centisome position: 7.82
GC content: 56.22
Gene sequence:
>603_bases ATGCTGCGTCTTGATCCTGATCCCAGTTTTCAGCCTGGGGATTCCTTGCAGGACAACCGTGGGCGTGTGGCCATATTCAT CGACGGGTCTAATCTGTTCTACGCCGCTCTGCAACTGGGCATTGAGATCGACTACACCCGTCTGCTGAAGACGCTGAGTG GTCGGTCGCCCCTTTTGCGCTCTTTTTTCTACACCGGCGTCGATCGCAACAACGAAAAGCAGCAGGGGTTTTTGCTCTGG ATGCGCCGCAATGGCTACCGCGTGGTTACCAAAGAGCTAACCCAGTTGCCCGATGGATCCAAGAGAGCCAACCTGGATGT GGAAATTGCCGTGGATATGCTGTCGCTGGTGCGCTGGTATGAGACGGCTGTGCTGGTGAGCGGCGATGGAGACTTGGCCT ATGCGGTCAATGCCGTTAGCTACCAAGGGGCACGAGTGGAGGTGGTCAGCTTGCGTTCCATGACCAGCGATCAACTGATC AACTTGGCGGATCGCTACATCGACCTGGAATCCATCAAAGACCAAATCAAGAAGACCAACCGTCCCTCCTCCGCCTACCT GTACCGACCGGGGTTCACCGCCGATGAGGAGGACGAGGGATAA
Upstream 100 bases:
>100_bases CTGTAGTCGGTGCTGCCGGAAAGAGCTGTATTGGCGATTAAACCCATTTAACACCTCGTTTTTTCTGCCCTTTTGTCAAA ACTTGGAGAAGAAAACCCGA
Downstream 100 bases:
>100_bases CTTTCCCTCCCCCACAGGGAGAAGGGAAAGCAGAGCAACGGGGGGCTTACTGGGCTTTCCAATTTGAAGGGATCCCTTGC AGCAGGTAAACCGGGTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MLRLDPDPSFQPGDSLQDNRGRVAIFIDGSNLFYAALQLGIEIDYTRLLKTLSGRSPLLRSFFYTGVDRNNEKQQGFLLW MRRNGYRVVTKELTQLPDGSKRANLDVEIAVDMLSLVRWYETAVLVSGDGDLAYAVNAVSYQGARVEVVSLRSMTSDQLI NLADRYIDLESIKDQIKKTNRPSSAYLYRPGFTADEEDEG
Sequences:
>Translated_200_residues MLRLDPDPSFQPGDSLQDNRGRVAIFIDGSNLFYAALQLGIEIDYTRLLKTLSGRSPLLRSFFYTGVDRNNEKQQGFLLW MRRNGYRVVTKELTQLPDGSKRANLDVEIAVDMLSLVRWYETAVLVSGDGDLAYAVNAVSYQGARVEVVSLRSMTSDQLI NLADRYIDLESIKDQIKKTNRPSSAYLYRPGFTADEEDEG >Mature_200_residues MLRLDPDPSFQPGDSLQDNRGRVAIFIDGSNLFYAALQLGIEIDYTRLLKTLSGRSPLLRSFFYTGVDRNNEKQQGFLLW MRRNGYRVVTKELTQLPDGSKRANLDVEIAVDMLSLVRWYETAVLVSGDGDLAYAVNAVSYQGARVEVVSLRSMTSDQLI NLADRYIDLESIKDQIKKTNRPSSAYLYRPGFTADEEDEG
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22614; Mature: 22614
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLDPDPSFQPGDSLQDNRGRVAIFIDGSNLFYAALQLGIEIDYTRLLKTLSGRSPLLR CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEHHHCCCCCHHHHHHHHCCCCHHHH SFFYTGVDRNNEKQQGFLLWMRRNGYRVVTKELTQLPDGSKRANLDVEIAVDMLSLVRWY HHHHHCCCCCCCCCCCEEEEEECCCCEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ETAVLVSGDGDLAYAVNAVSYQGARVEVVSLRSMTSDQLINLADRYIDLESIKDQIKKTN HEEEEEECCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCC RPSSAYLYRPGFTADEEDEG CCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MLRLDPDPSFQPGDSLQDNRGRVAIFIDGSNLFYAALQLGIEIDYTRLLKTLSGRSPLLR CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEHHHCCCCCHHHHHHHHCCCCHHHH SFFYTGVDRNNEKQQGFLLWMRRNGYRVVTKELTQLPDGSKRANLDVEIAVDMLSLVRWY HHHHHCCCCCCCCCCCEEEEEECCCCEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ETAVLVSGDGDLAYAVNAVSYQGARVEVVSLRSMTSDQLINLADRYIDLESIKDQIKKTN HEEEEEECCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCC RPSSAYLYRPGFTADEEDEG CCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA