| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86607700
Identifier: 86607700
GI number: 86607700
Start: 211182
End: 211715
Strand: Reverse
Name: 86607700
Synonym: CYB_0199
Alternate gene names: NA
Gene position: 211715-211182 (Counterclockwise)
Preceding gene: 86607701
Following gene: 86607697
Centisome position: 6.95
GC content: 58.61
Gene sequence:
>534_bases ATGGATGTTCAAAGCCCACTGCAACCGGATCCCTCTCTAGGGGGTGCTACTCCACTCCAAGCTCTGCAGGCCCTAAACCA GAGTGTTGCCGAAGCTTTGGTTTCCTGCTTGAAAGGGCAACCCCAACAGGCCACTCAGCACCTTTTGCTGGCTCTGCCGC AGCTCATGGCGGCTCTGGGGGCCTTGAGGCAAAAATCTTCCCTTCGCGTGAGCGGGCCGGAGGTCTTGGCCGAGCCTGCA GGCTGCCCTTCAGAAGCCCAGCCCAAGCGCATCCTTCACATCGAAGGCAACCGCGTGGAAGTGTGGGTGGATAACCAAAT TCGCAGCAGTTGGAGCATTTGGTCGGTGGGAGATCTCAAGGAAGTCTGTCGGCTGGCAGAAGAGTTCGACTGTGGCCTCA GCTATTCTCTAGGAGGAAACTCAGAGTCTCAGTCGGAGATGCTGCTGTTGCCCTCCAATTCTGATGATTTGTCCGACCGG CTCTCCAACCCCGTTCACGTAAGCGGGCCGGAGGCCCCAGGCTCTGCCGCCTAG
Upstream 100 bases:
>100_bases TGCGCAAACCAGAGCGCTCTGCTCCAAAGGGCAGCGGCGTTGTTGTGGTCAACCTGCGAAAGGGCTGTAAGGTTGCTGTC CATGCCTTTCCTGCCTTTTC
Downstream 100 bases:
>100_bases GTTGTGTTGATCTTTCATTTGAGCCAAAAGAGAGCACTGACGAGATAGAGAAAACTCAAGAAGTTCCTGGCCAATTTGTC AAAACGAGAAAATAGATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MDVQSPLQPDPSLGGATPLQALQALNQSVAEALVSCLKGQPQQATQHLLLALPQLMAALGALRQKSSLRVSGPEVLAEPA GCPSEAQPKRILHIEGNRVEVWVDNQIRSSWSIWSVGDLKEVCRLAEEFDCGLSYSLGGNSESQSEMLLLPSNSDDLSDR LSNPVHVSGPEAPGSAA
Sequences:
>Translated_177_residues MDVQSPLQPDPSLGGATPLQALQALNQSVAEALVSCLKGQPQQATQHLLLALPQLMAALGALRQKSSLRVSGPEVLAEPA GCPSEAQPKRILHIEGNRVEVWVDNQIRSSWSIWSVGDLKEVCRLAEEFDCGLSYSLGGNSESQSEMLLLPSNSDDLSDR LSNPVHVSGPEAPGSAA >Mature_177_residues MDVQSPLQPDPSLGGATPLQALQALNQSVAEALVSCLKGQPQQATQHLLLALPQLMAALGALRQKSSLRVSGPEVLAEPA GCPSEAQPKRILHIEGNRVEVWVDNQIRSSWSIWSVGDLKEVCRLAEEFDCGLSYSLGGNSESQSEMLLLPSNSDDLSDR LSNPVHVSGPEAPGSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18758; Mature: 18758
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVQSPLQPDPSLGGATPLQALQALNQSVAEALVSCLKGQPQQATQHLLLALPQLMAALG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ALRQKSSLRVSGPEVLAEPAGCPSEAQPKRILHIEGNRVEVWVDNQIRSSWSIWSVGDLK HHHHCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCHH EVCRLAEEFDCGLSYSLGGNSESQSEMLLLPSNSDDLSDRLSNPVHVSGPEAPGSAA HHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCCCHHHHHHCCCEEECCCCCCCCCC >Mature Secondary Structure MDVQSPLQPDPSLGGATPLQALQALNQSVAEALVSCLKGQPQQATQHLLLALPQLMAALG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ALRQKSSLRVSGPEVLAEPAGCPSEAQPKRILHIEGNRVEVWVDNQIRSSWSIWSVGDLK HHHHCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCHH EVCRLAEEFDCGLSYSLGGNSESQSEMLLLPSNSDDLSDRLSNPVHVSGPEAPGSAA HHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCCCHHHHHHCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA