Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607674

Identifier: 86607674

GI number: 86607674

Start: 184891

End: 186201

Strand: Reverse

Name: 86607674

Synonym: CYB_0172

Alternate gene names: NA

Gene position: 186201-184891 (Counterclockwise)

Preceding gene: 86607675

Following gene: 86607672

Centisome position: 6.11

GC content: 52.33

Gene sequence:

>1311_bases
GTGGGTGTATCTTATCGCAGGTCTAACAGGGCAAAAGCCGTCCTGGAAGGGCGGGGCTTCAGGCCTAGCTTCTTGGTAAA
GTTTGGAACTGCCCGCATTCGGGATTGCCTTAAACTTCTCTTAAATCCTGTTTCACAGGTAACTGCTAGCATGAGGCCAA
CTTCACTCCCACCCCCGGAAAGGAAGGCCTTTATGAACTGGCTGATGCTGCTTGGTCTGCTTTGTCTTCCTGCCTCTCTG
TTTTCGTTTGTTGAGTATTTGCGCTCCCAAAGGTTGGTTCAACAGCTCTCTGCAACTCGGTTGCTCAAGATAGCCGAGCT
TCGCCATCTCGGTCAGACCAACCCCCAGGCAAAAGGAGCAAACTTGGCTCAAGTTTACGGCAGGGTTGTGTGCGATCGGC
CTTTGGTATCGGAACTTTCGCGACAGCCTTGCGTCTACTACAAGTCTGAGATCTCTTGGGAGTATGACGAGATCGAATGC
TATCGAAGGTATTTGAATAGCCGAGGCGATGTAGCGTATAGCGAACGGATCAGCGAAGGCGAATATCAGAACGCTCTACG
CTTGGGATCCCGAGCAAAATCCTATCCGGGGGAGATGGTCGGGAAAAAGCCCGGCTTGGGCTACTCTGACTCCGGTTCTT
TTCAGAAAAGGGTTGATCCCGACTACTCTAATTCTTTTCCACAAAAGCCCAACCCTGGCTACCCCCAGCAGCTTGGCTCT
CCAGGCTATCCTCAAAAATCGCCGTTTTCCGAAGTAAGCTCTCCCCAAAAACACTACGCCAACGTGTATTACGATCCGAG
CACAGGTCGGGAATATCTCCTTGAAAGAGAGACGAGAACGAGAGACGAAACCCTTCACTCGGTGGTTCGCCAGATCCCTT
TTTTCATCGAAGACGAAACTGGAAGGGTGAGGGTGGATCCCACAGGTGCGGAGATAGAGGCTATGTCGGTTGTGGATGAG
CATATTTTTCCAGGAAAAGGGCCCAGCCGGTTCAACTTCAATCTCAAGCGCTACCTTTCCGGAGTGAGAACAGAAAATCG
CTCCACCCGAGCTTTTATCTATAAGGAATGGGTGATTCCGGTGGATGCGATGGCGTTTACCATGGGGCAGGTGCGTTTTG
AGGCAGGGGATCCCGTGATCCGAAAACCCCTTTCTGGGGAAAGGTTTATGATTGCCCCCAAATCCCCTGAAGCCCTCTTG
GAAGAGCAGCGCTCCAATGCCAGCAGCTACCTGGTGGGATCCGTCGTCCTGCTGGGTATCGGCATTTTCACCGTGCTCCA
CCTGCTGCAATCCCTGCAGCCTTATCGCTAG

Upstream 100 bases:

>100_bases
TCGCCCACATCCAGCCCCACCACCTGGCCGGTGTACTCTGTCATCCAAGGCTTGGTACTGCGCTGGAGTGGCGTTGAGGA
GTTTGGCTTCTCTGACCAGC

Downstream 100 bases:

>100_bases
TTCCTGCCCAGGCAGAGGGAAGCCTACTGCCACTCACAACGACAAACCCAGCTTGAGCCCAAGCAGGGCATGGGCAAACA
GTACACATAGAATGAGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MGVSYRRSNRAKAVLEGRGFRPSFLVKFGTARIRDCLKLLLNPVSQVTASMRPTSLPPPERKAFMNWLMLLGLLCLPASL
FSFVEYLRSQRLVQQLSATRLLKIAELRHLGQTNPQAKGANLAQVYGRVVCDRPLVSELSRQPCVYYKSEISWEYDEIEC
YRRYLNSRGDVAYSERISEGEYQNALRLGSRAKSYPGEMVGKKPGLGYSDSGSFQKRVDPDYSNSFPQKPNPGYPQQLGS
PGYPQKSPFSEVSSPQKHYANVYYDPSTGREYLLERETRTRDETLHSVVRQIPFFIEDETGRVRVDPTGAEIEAMSVVDE
HIFPGKGPSRFNFNLKRYLSGVRTENRSTRAFIYKEWVIPVDAMAFTMGQVRFEAGDPVIRKPLSGERFMIAPKSPEALL
EEQRSNASSYLVGSVVLLGIGIFTVLHLLQSLQPYR

Sequences:

>Translated_436_residues
MGVSYRRSNRAKAVLEGRGFRPSFLVKFGTARIRDCLKLLLNPVSQVTASMRPTSLPPPERKAFMNWLMLLGLLCLPASL
FSFVEYLRSQRLVQQLSATRLLKIAELRHLGQTNPQAKGANLAQVYGRVVCDRPLVSELSRQPCVYYKSEISWEYDEIEC
YRRYLNSRGDVAYSERISEGEYQNALRLGSRAKSYPGEMVGKKPGLGYSDSGSFQKRVDPDYSNSFPQKPNPGYPQQLGS
PGYPQKSPFSEVSSPQKHYANVYYDPSTGREYLLERETRTRDETLHSVVRQIPFFIEDETGRVRVDPTGAEIEAMSVVDE
HIFPGKGPSRFNFNLKRYLSGVRTENRSTRAFIYKEWVIPVDAMAFTMGQVRFEAGDPVIRKPLSGERFMIAPKSPEALL
EEQRSNASSYLVGSVVLLGIGIFTVLHLLQSLQPYR
>Mature_435_residues
GVSYRRSNRAKAVLEGRGFRPSFLVKFGTARIRDCLKLLLNPVSQVTASMRPTSLPPPERKAFMNWLMLLGLLCLPASLF
SFVEYLRSQRLVQQLSATRLLKIAELRHLGQTNPQAKGANLAQVYGRVVCDRPLVSELSRQPCVYYKSEISWEYDEIECY
RRYLNSRGDVAYSERISEGEYQNALRLGSRAKSYPGEMVGKKPGLGYSDSGSFQKRVDPDYSNSFPQKPNPGYPQQLGSP
GYPQKSPFSEVSSPQKHYANVYYDPSTGREYLLERETRTRDETLHSVVRQIPFFIEDETGRVRVDPTGAEIEAMSVVDEH
IFPGKGPSRFNFNLKRYLSGVRTENRSTRAFIYKEWVIPVDAMAFTMGQVRFEAGDPVIRKPLSGERFMIAPKSPEALLE
EQRSNASSYLVGSVVLLGIGIFTVLHLLQSLQPYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49441; Mature: 49310

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GVSYRRSNRAKAVLEGRGFRPSFLVKFGTARIRDCLKLLLNPVSQVTASMRPTSLPPPE
CCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
RKAFMNWLMLLGLLCLPASLFSFVEYLRSQRLVQQLSATRLLKIAELRHLGQTNPQAKGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NLAQVYGRVVCDRPLVSELSRQPCVYYKSEISWEYDEIECYRRYLNSRGDVAYSERISEG
HHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCC
EYQNALRLGSRAKSYPGEMVGKKPGLGYSDSGSFQKRVDPDYSNSFPQKPNPGYPQQLGS
HHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHCCC
PGYPQKSPFSEVSSPQKHYANVYYDPSTGREYLLERETRTRDETLHSVVRQIPFFIEDET
CCCCCCCCHHHHCCCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
GRVRVDPTGAEIEAMSVVDEHIFPGKGPSRFNFNLKRYLSGVRTENRSTRAFIYKEWVIP
CEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCC
VDAMAFTMGQVRFEAGDPVIRKPLSGERFMIAPKSPEALLEEQRSNASSYLVGSVVLLGI
HHHHHHHHHHEEECCCCHHHCCCCCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHH
GIFTVLHLLQSLQPYR
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA