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The map label for this gene is 86607672

Identifier: 86607672

GI number: 86607672

Start: 183572

End: 183931

Strand: Reverse

Name: 86607672

Synonym: CYB_0170

Alternate gene names: NA

Gene position: 183931-183572 (Counterclockwise)

Preceding gene: 86607674

Following gene: 86607671

Centisome position: 6.04

GC content: 58.89

Gene sequence:

>360_bases
GTGGAGGCCGAGGATGACCACATAGCCGGCTCCTATAAGGTGGTCTATCGTTTGGCGCCTGCCTATCCCCGCAGCTGGCG
GCTACTCCTGGAGCGGGAGAGCGTCGCCACGGCGCCTCAGGTGGCATCGGCTCCAGAACCAGAGGTTGCTCAGGCCAGCA
GCTCAGAAGGAGGGCTGCCCAATAGCGATAAAATCTTCGCCATCAAGGTATCCGGCCTCGTGGGAGGAGGTGTGCGCAGA
AGTGTTGTCGAGTACAAAGTGCCCTTCAGCCGCCTTTCCCAAGAAGTGAAACGGATCACCCAAATGGGAGGCAAGATCGT
CAGCATTGCCGAGTCCAATCTGCTAAGCACCCTTGAGTAG

Upstream 100 bases:

>100_bases
TGAGGTCGAGCTGCTGACGGATGTGCCCACCAATTGGCCGGGAATTAAAGTCATGTCTAAGGGGGCCAAGCTGGACATTC
CAGCGGGAACTGTGGTGAAG

Downstream 100 bases:

>100_bases
CGGGCGGCTTCCTGGGAGGTTCTGGGTTCTTTCAGGCCACCTGTCCAGGCCGTTCTGGTTCAAACAATTTCAACGAGGGA
TCCCTGTAGAAAGCATGCGG

Product: CpcD/allophycocyanin linker domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MEAEDDHIAGSYKVVYRLAPAYPRSWRLLLERESVATAPQVASAPEPEVAQASSSEGGLPNSDKIFAIKVSGLVGGGVRR
SVVEYKVPFSRLSQEVKRITQMGGKIVSIAESNLLSTLE

Sequences:

>Translated_119_residues
MEAEDDHIAGSYKVVYRLAPAYPRSWRLLLERESVATAPQVASAPEPEVAQASSSEGGLPNSDKIFAIKVSGLVGGGVRR
SVVEYKVPFSRLSQEVKRITQMGGKIVSIAESNLLSTLE
>Mature_119_residues
MEAEDDHIAGSYKVVYRLAPAYPRSWRLLLERESVATAPQVASAPEPEVAQASSSEGGLPNSDKIFAIKVSGLVGGGVRR
SVVEYKVPFSRLSQEVKRITQMGGKIVSIAESNLLSTLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12831; Mature: 12831

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAEDDHIAGSYKVVYRLAPAYPRSWRLLLERESVATAPQVASAPEPEVAQASSSEGGLP
CCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NSDKIFAIKVSGLVGGGVRRSVVEYKVPFSRLSQEVKRITQMGGKIVSIAESNLLSTLE
CCCCEEEEEECCEECCCHHHHHHHEECCHHHHHHHHHHHHHCCCEEEEEHHCCHHHHCC
>Mature Secondary Structure
MEAEDDHIAGSYKVVYRLAPAYPRSWRLLLERESVATAPQVASAPEPEVAQASSSEGGLP
CCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NSDKIFAIKVSGLVGGGVRRSVVEYKVPFSRLSQEVKRITQMGGKIVSIAESNLLSTLE
CCCCEEEEEECCEECCCHHHHHHHEECCHHHHHHHHHHHHHCCCEEEEEHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA