| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607655
Identifier: 86607655
GI number: 86607655
Start: 168273
End: 168617
Strand: Reverse
Name: 86607655
Synonym: CYB_0153
Alternate gene names: NA
Gene position: 168617-168273 (Counterclockwise)
Preceding gene: 86607656
Following gene: 86607654
Centisome position: 5.53
GC content: 46.38
Gene sequence:
>345_bases ATGCTAGATGATGAACCAGAAGTTTATAAATTGGATATTTACATCGGCGAGTCAGACCGTTGGCAAGGGAAGCCTCTCTA CCTGGCTCTGCTGGAGCTAGGTCGTCAGCGTGGGCTAGCTGGTGGTACTGTGGTGCGAGCTATTGCTGGCTTTGGTCGAA ACAGTCATATTCGCAGCAGTAACCTTCTAGAGCTTTCCACAGATCTGCCCATTTTGGTAACTTTCATCGACACGCCGGAA AAAATCAAAGCCTTTCTACCGGAAGTAAAAACTCTGATGCATGACGGTCTAGTTACTTGCCATAGGGTACAAGTATTCCA TCATGTTCCTCATCAACAACAATAG
Upstream 100 bases:
>100_bases TTGCCTGACAAGGATCCCACTTCACTGTAGACCTTATGTGAAGCGGAAAAATCTGTAACCATGACAATCGCAACAGCCCA AAAACAAAAGGGATACAAGT
Downstream 100 bases:
>100_bases TCCAGATCTGAAAATAGATTCCCCATTGCCAAGGAGCTGGTTATGCCCGATTCCCCTTCTGCCCTGCGCTTTATTGTTTT GCTGGGGATCGTCAGCCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MLDDEPEVYKLDIYIGESDRWQGKPLYLALLELGRQRGLAGGTVVRAIAGFGRNSHIRSSNLLELSTDLPILVTFIDTPE KIKAFLPEVKTLMHDGLVTCHRVQVFHHVPHQQQ
Sequences:
>Translated_114_residues MLDDEPEVYKLDIYIGESDRWQGKPLYLALLELGRQRGLAGGTVVRAIAGFGRNSHIRSSNLLELSTDLPILVTFIDTPE KIKAFLPEVKTLMHDGLVTCHRVQVFHHVPHQQQ >Mature_114_residues MLDDEPEVYKLDIYIGESDRWQGKPLYLALLELGRQRGLAGGTVVRAIAGFGRNSHIRSSNLLELSTDLPILVTFIDTPE KIKAFLPEVKTLMHDGLVTCHRVQVFHHVPHQQQ
Specific function: Unknown
COG id: COG1993
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0166 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003793 - InterPro: IPR011322 - InterPro: IPR015867 [H]
Pfam domain/function: PF02641 DUF190 [H]
EC number: NA
Molecular weight: Translated: 12900; Mature: 12900
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDDEPEVYKLDIYIGESDRWQGKPLYLALLELGRQRGLAGGTVVRAIAGFGRNSHIRSS CCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC NLLELSTDLPILVTFIDTPEKIKAFLPEVKTLMHDGLVTCHRVQVFHHVPHQQQ CCEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLDDEPEVYKLDIYIGESDRWQGKPLYLALLELGRQRGLAGGTVVRAIAGFGRNSHIRSS CCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC NLLELSTDLPILVTFIDTPEKIKAFLPEVKTLMHDGLVTCHRVQVFHHVPHQQQ CCEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]