| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607585
Identifier: 86607585
GI number: 86607585
Start: 98090
End: 98473
Strand: Reverse
Name: 86607585
Synonym: CYB_0083
Alternate gene names: NA
Gene position: 98473-98090 (Counterclockwise)
Preceding gene: 86607586
Following gene: 86607584
Centisome position: 3.23
GC content: 57.29
Gene sequence:
>384_bases ATGCGACTGTTCAACTACCTGATCTTGTTTTCAGCCCTCCTGGCCATTGCCCTCTTTGCCATGCAAAACGCCACCCCGGT CACGGTTACTTTTGCCCCCGGCGTCAGCGTTGAAAGCCCTCTGGTGATGGAACTTCTGGCATCTGCCGGGATTGGGGCCG CCCTCGCCTGGCTGTATAGCCTCTGGATGCGCGTACAGTTCAGCATCGAAGCCCGGGAAAAAAATCGGCAACTGCAGGAG AAGGAGGTCACCATCACCGAACTCAAGGAAATGGTGGTGGAGCTGGAAGCCAAAGTGAAGCAACTGCCCCCCAGCAAGCG CGCCGAACCCCAAGAAGACATCCAGGACGTAAAAGAAGTGGCCACTGAGGGATCCCCTGCCTAG
Upstream 100 bases:
>100_bases TGGCTGGTTTTTCTGAGGGAATTTTTCTCAAAAACCGGCCCGAGTTTATGGGTATTCTGGTGCTGGCAAGCCGTAGTGGA TCCCTTCGAGGAGAAAAACG
Downstream 100 bases:
>100_bases AATCTCCAGGTTGACCCACAGGCCGTTGAGGTAGAATTGAACTTCTGCTTGCCCACTAGCTCATACTTCCTATGCAGGTC ACACAAGAAAAACGCCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MRLFNYLILFSALLAIALFAMQNATPVTVTFAPGVSVESPLVMELLASAGIGAALAWLYSLWMRVQFSIEAREKNRQLQE KEVTITELKEMVVELEAKVKQLPPSKRAEPQEDIQDVKEVATEGSPA
Sequences:
>Translated_127_residues MRLFNYLILFSALLAIALFAMQNATPVTVTFAPGVSVESPLVMELLASAGIGAALAWLYSLWMRVQFSIEAREKNRQLQE KEVTITELKEMVVELEAKVKQLPPSKRAEPQEDIQDVKEVATEGSPA >Mature_127_residues MRLFNYLILFSALLAIALFAMQNATPVTVTFAPGVSVESPLVMELLASAGIGAALAWLYSLWMRVQFSIEAREKNRQLQE KEVTITELKEMVVELEAKVKQLPPSKRAEPQEDIQDVKEVATEGSPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14092; Mature: 14092
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFNYLILFSALLAIALFAMQNATPVTVTFAPGVSVESPLVMELLASAGIGAALAWLYS CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHH LWMRVQFSIEAREKNRQLQEKEVTITELKEMVVELEAKVKQLPPSKRAEPQEDIQDVKEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH ATEGSPA HHCCCCC >Mature Secondary Structure MRLFNYLILFSALLAIALFAMQNATPVTVTFAPGVSVESPLVMELLASAGIGAALAWLYS CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHH LWMRVQFSIEAREKNRQLQEKEVTITELKEMVVELEAKVKQLPPSKRAEPQEDIQDVKEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH ATEGSPA HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA