| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607567
Identifier: 86607567
GI number: 86607567
Start: 77357
End: 77884
Strand: Reverse
Name: 86607567
Synonym: CYB_0065
Alternate gene names: NA
Gene position: 77884-77357 (Counterclockwise)
Preceding gene: 86607568
Following gene: 86607566
Centisome position: 2.56
GC content: 47.16
Gene sequence:
>528_bases ATGTTTTACCATCATCCCGTCACTCGGGTTTCCATCTTTATTGATGGCAATAATATGTTTTATGCTCAACAGAAAAATGG CTGGTTTTTTGACCCACGCCGGGTGCTGGATTATTTTGTTAGATCACAGCCAAATGTTGAATTGGTCAACGCCTTTTGGT ACACCGGCATCAAGGATCCCCATGATCAGAGGGCCTTTCGAGACGCTCTGATCAGCATGGGCTTCACTGTGCGCACCAAG ATCCTCAAAGAATATCGAGATGAAGACTCCGGTCGGTACTCCCAAAAAGCAAATCTGGATATCGAAATAGTAATCGATAT GTTCAACACCGTTGGGCAGTACGATAGGATCATTTTGTTTAGCGGTGATGGAGATTTTGAGCGGGCTGTCGAGTTGTTGC GTTCCAAAAACACGCTGATTACAGTTGTCTCCACCGAAGGGATGATCGCCCGCGAGCTGCGCAACGCCACCGACCGCTAC ATCGACCTCAATGACATTCGCCCCTACATTGAGAAGTTAGACAAGTAG
Upstream 100 bases:
>100_bases CAAGGTGCTGGCTGCCCAAATGGCTCTTGTGGAAAGTCAGTGACCTCGTTTTCATCCTCTTTTTCTGACCAGTTCACCTT ACTTTTTTCGGAAAAGCTTT
Downstream 100 bases:
>100_bases TGCTTTGGGCAGGGTTCTGGACTGCTTCCTCTGCCGTCGGGTCAGACCCATAGCCTCCTGGCGAGCTGGCGACAACACCG CCCGAGTTCGTTCTGGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MFYHHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDPHDQRAFRDALISMGFTVRTK ILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDRIILFSGDGDFERAVELLRSKNTLITVVSTEGMIARELRNATDRY IDLNDIRPYIEKLDK
Sequences:
>Translated_175_residues MFYHHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDPHDQRAFRDALISMGFTVRTK ILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDRIILFSGDGDFERAVELLRSKNTLITVVSTEGMIARELRNATDRY IDLNDIRPYIEKLDK >Mature_175_residues MFYHHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDPHDQRAFRDALISMGFTVRTK ILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDRIILFSGDGDFERAVELLRSKNTLITVVSTEGMIARELRNATDRY IDLNDIRPYIEKLDK
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20665; Mature: 20665
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYHHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDP CCCCCCCEEEEEEEECCEEEEEECCCCCEECHHHHHHHHHHCCCCEEEEEEEHHCCCCCC HDQRAFRDALISMGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDRIILF HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHEEHHHCCCCCCEEEEE SGDGDFERAVELLRSKNTLITVVSTEGMIARELRNATDRYIDLNDIRPYIEKLDK CCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCEEEHHHHHHHHHHHCC >Mature Secondary Structure MFYHHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDP CCCCCCCEEEEEEEECCEEEEEECCCCCEECHHHHHHHHHHCCCCEEEEEEEHHCCCCCC HDQRAFRDALISMGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDRIILF HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHEEHHHCCCCCCEEEEE SGDGDFERAVELLRSKNTLITVVSTEGMIARELRNATDRYIDLNDIRPYIEKLDK CCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA