Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607532

Identifier: 86607532

GI number: 86607532

Start: 38532

End: 39323

Strand: Reverse

Name: 86607532

Synonym: CYB_0030

Alternate gene names: NA

Gene position: 39323-38532 (Counterclockwise)

Preceding gene: 86607534

Following gene: 86607531

Centisome position: 1.29

GC content: 57.7

Gene sequence:

>792_bases
ATGGCGATGCAGCGGGACTTACAAGAGCTGATCATCTCCCCAGCTCAAGTTCAAAGCCTCTCTCAAGTGCCGGTGGCTTG
GTTGTATCGGCCTCGGCCCGTTCGTCGTTTTAAAGACCGTCTGCGCCAGTTCTCCGCTTTCTGGGATCTCCTACGCTTGC
TGGTGACGCTGGACTTGTTCTTGCGTTTCTTGACCTTCTGGACAGGGGGATCCCTACTTACCCTGGTGGGGCGGATTTGG
ATCCCTGGCCTACAGGCCACTTGGGGCACTTGGCTGGTGGAATGGGGGATCCTGGCGGCTATTGCCGCTCTGGGCCAAGC
CTATTGGATTTTCCGCAGCCGTCGCATGCCGCTGCTGTTGAACTTGCTGGGGGAAGTGGATCGCTACAACCGAATCATCC
AGGCCATCCACGTCAACGACCAGTTGGTGGAAGCGGGCAACCCCGAGGTGAAGCTGGCCCAGAGGGCTGAGGTGATCGAA
GCCCTGAAGCTGACCCGGGCCGATCTCATTCGCGCCTTGAAAACCGAACGGATCTTGCGGCAAAACGAAGACCTGATCGA
GCAGCAGAGCGAGTTCTTCGGCGATAACTTGGCAGCTTTGACAGCTCTGCAGGTGAGCGAGCAGGCCAGCGAACAGGGGC
GAATCCTGGAGGCTGCTTTACAGATTGCTCTGCAGGTGCGCTCCCAAATCCGCCGTTTGCAAGAGCGAGAAGCCAACCAC
CCCCCAAACAGGGATCCAGACAAGATTGAGAAAGATCAGCAGGATAGAGATGGCAACTCAGATGGGCAGTGA

Upstream 100 bases:

>100_bases
TTGGCCAGGCAGCTTCCCTTCTGGAAGGGATCCCTGAGCAAGCCCAAGCTGCTCAAGGTCGCAAGTACAATGGGAAAACT
TCCCAGCCTCAGCAGAGCAA

Downstream 100 bases:

>100_bases
AACAGATGGTTATTTTTGTCGGCAGGCGGCGCTGTGGGTTCTAATCCTTGGGAGAAAGTTGAGGTTGATTGCACCGCGTT
AGCAGGTCGGAGACCGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MAMQRDLQELIISPAQVQSLSQVPVAWLYRPRPVRRFKDRLRQFSAFWDLLRLLVTLDLFLRFLTFWTGGSLLTLVGRIW
IPGLQATWGTWLVEWGILAAIAALGQAYWIFRSRRMPLLLNLLGEVDRYNRIIQAIHVNDQLVEAGNPEVKLAQRAEVIE
ALKLTRADLIRALKTERILRQNEDLIEQQSEFFGDNLAALTALQVSEQASEQGRILEAALQIALQVRSQIRRLQEREANH
PPNRDPDKIEKDQQDRDGNSDGQ

Sequences:

>Translated_263_residues
MAMQRDLQELIISPAQVQSLSQVPVAWLYRPRPVRRFKDRLRQFSAFWDLLRLLVTLDLFLRFLTFWTGGSLLTLVGRIW
IPGLQATWGTWLVEWGILAAIAALGQAYWIFRSRRMPLLLNLLGEVDRYNRIIQAIHVNDQLVEAGNPEVKLAQRAEVIE
ALKLTRADLIRALKTERILRQNEDLIEQQSEFFGDNLAALTALQVSEQASEQGRILEAALQIALQVRSQIRRLQEREANH
PPNRDPDKIEKDQQDRDGNSDGQ
>Mature_262_residues
AMQRDLQELIISPAQVQSLSQVPVAWLYRPRPVRRFKDRLRQFSAFWDLLRLLVTLDLFLRFLTFWTGGSLLTLVGRIWI
PGLQATWGTWLVEWGILAAIAALGQAYWIFRSRRMPLLLNLLGEVDRYNRIIQAIHVNDQLVEAGNPEVKLAQRAEVIEA
LKLTRADLIRALKTERILRQNEDLIEQQSEFFGDNLAALTALQVSEQASEQGRILEAALQIALQVRSQIRRLQEREANHP
PNRDPDKIEKDQQDRDGNSDGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30308; Mature: 30177

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMQRDLQELIISPAQVQSLSQVPVAWLYRPRPVRRFKDRLRQFSAFWDLLRLLVTLDLF
CCHHHHHHHHHCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRFLTFWTGGSLLTLVGRIWIPGLQATWGTWLVEWGILAAIAALGQAYWIFRSRRMPLLL
HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
NLLGEVDRYNRIIQAIHVNDQLVEAGNPEVKLAQRAEVIEALKLTRADLIRALKTERILR
HHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNEDLIEQQSEFFGDNLAALTALQVSEQASEQGRILEAALQIALQVRSQIRRLQEREANH
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PPNRDPDKIEKDQQDRDGNSDGQ
CCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AMQRDLQELIISPAQVQSLSQVPVAWLYRPRPVRRFKDRLRQFSAFWDLLRLLVTLDLF
CHHHHHHHHHCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRFLTFWTGGSLLTLVGRIWIPGLQATWGTWLVEWGILAAIAALGQAYWIFRSRRMPLLL
HHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
NLLGEVDRYNRIIQAIHVNDQLVEAGNPEVKLAQRAEVIEALKLTRADLIRALKTERILR
HHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNEDLIEQQSEFFGDNLAALTALQVSEQASEQGRILEAALQIALQVRSQIRRLQEREANH
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PPNRDPDKIEKDQQDRDGNSDGQ
CCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA