Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86361085
Identifier: 86361085
GI number: 86361085
Start: 398587
End: 399270
Strand: Reverse
Name: 86361085
Synonym: RHE_PF00355
Alternate gene names: NA
Gene position: 399270-398587 (Counterclockwise)
Preceding gene: 86361090
Following gene: 86361074
Centisome position: 62.14
GC content: 55.99
Gene sequence:
>684_bases ATGCCGACGGATTTCAATGACTCCCCTGCGCTTGCCATGATCCATACGGTTCCTGGGATCATCCCCGCGTTCAACGAACT CGTCGGTCTCCATCTGCCCGGTTGGCGCTCGTTCAACATGTTAGATGAGAGCCTCCTGGGAAACACCATTCGAGAGGGTG TGCTGTCTTCTCAAACCATGCGGCGGCTTACCGGTCACATTTGGTCGGCGGTGGATGCAGGAGCTTCGGCGGTCCTCGTC ACCTGTTCCTCACTCGGCCCTGCAGTGGATGCGGCAATGCCGCTCTGCCCCGTACCGCTCTTCCGGATAGATGATGGCAT GGCGATTGAGGCGATCCGACGCGGAAATCGAATTGGCGTCCTTGCAACTCTGGCTACGACGATGAATCCTACAACCCGGC TAATTGAACTCCATGCTCAAAGAATAGGGCATAGGGTTTCTGTGACTGGTCGTGTTTGTGATGGCGCCTTTGAAAAATTG CGAAGCGGGGACAGGGCGACGCATGATGCAATAATACGTGAAGGTCTCGCTTCACTCGTGGACAGCGTCGACGTGGTTGT TCTTGCTCAAGCGTCAATGGCGAACGCTCTCAATGAAATAAGCCAGGCATCAGTTCCGGTGCTTACGAGCCCTGAGCTTG GTGTCCTGCACATGTCCTCCGCACTGAAGGCGCTCCCACGTTGA
Upstream 100 bases:
>100_bases GTTGTAAAGTGCCTGCTCGATCTCCGGTCGTAGCACGATAGATGCCGGGATCAGGGCCAGAACCCGATTGCTGCCCACAA AAAAAATCGAGAACTAAGCC
Downstream 100 bases:
>100_bases AGAAAGTGCTCACAGTTATGCCAGCGGTTCACCGGTTTTCCGCAGATCGCAGGCCGGCTTGACGCTGCGCGATCCTGATC GCAAAGCGACCAAAGAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Asp/Glu Racemase
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MPTDFNDSPALAMIHTVPGIIPAFNELVGLHLPGWRSFNMLDESLLGNTIREGVLSSQTMRRLTGHIWSAVDAGASAVLV TCSSLGPAVDAAMPLCPVPLFRIDDGMAIEAIRRGNRIGVLATLATTMNPTTRLIELHAQRIGHRVSVTGRVCDGAFEKL RSGDRATHDAIIREGLASLVDSVDVVVLAQASMANALNEISQASVPVLTSPELGVLHMSSALKALPR
Sequences:
>Translated_227_residues MPTDFNDSPALAMIHTVPGIIPAFNELVGLHLPGWRSFNMLDESLLGNTIREGVLSSQTMRRLTGHIWSAVDAGASAVLV TCSSLGPAVDAAMPLCPVPLFRIDDGMAIEAIRRGNRIGVLATLATTMNPTTRLIELHAQRIGHRVSVTGRVCDGAFEKL RSGDRATHDAIIREGLASLVDSVDVVVLAQASMANALNEISQASVPVLTSPELGVLHMSSALKALPR >Mature_226_residues PTDFNDSPALAMIHTVPGIIPAFNELVGLHLPGWRSFNMLDESLLGNTIREGVLSSQTMRRLTGHIWSAVDAGASAVLVT CSSLGPAVDAAMPLCPVPLFRIDDGMAIEAIRRGNRIGVLATLATTMNPTTRLIELHAQRIGHRVSVTGRVCDGAFEKLR SGDRATHDAIIREGLASLVDSVDVVVLAQASMANALNEISQASVPVLTSPELGVLHMSSALKALPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24073; Mature: 23942
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDFNDSPALAMIHTVPGIIPAFNELVGLHLPGWRSFNMLDESLLGNTIREGVLSSQTM CCCCCCCCCCEEHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RRLTGHIWSAVDAGASAVLVTCSSLGPAVDAAMPLCPVPLFRIDDGMAIEAIRRGNRIGV HHHHHHHHHHHHCCCCEEEEEHHHCCCHHHHCCCCCCCCCEECCCCHHHHHHHCCCCEEH LATLATTMNPTTRLIELHAQRIGHRVSVTGRVCDGAFEKLRSGDRATHDAIIREGLASLV HHHHHHHCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DSVDVVVLAQASMANALNEISQASVPVLTSPELGVLHMSSALKALPR HHHHHHEEHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCC >Mature Secondary Structure PTDFNDSPALAMIHTVPGIIPAFNELVGLHLPGWRSFNMLDESLLGNTIREGVLSSQTM CCCCCCCCCEEHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RRLTGHIWSAVDAGASAVLVTCSSLGPAVDAAMPLCPVPLFRIDDGMAIEAIRRGNRIGV HHHHHHHHHHHHCCCCEEEEEHHHCCCHHHHCCCCCCCCCEECCCCHHHHHHHCCCCEEH LATLATTMNPTTRLIELHAQRIGHRVSVTGRVCDGAFEKLRSGDRATHDAIIREGLASLV HHHHHHHCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DSVDVVVLAQASMANALNEISQASVPVLTSPELGVLHMSSALKALPR HHHHHHEEHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA