Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360987
Identifier: 86360987
GI number: 86360987
Start: 276117
End: 276524
Strand: Reverse
Name: 86360987
Synonym: RHE_PF00257
Alternate gene names: NA
Gene position: 276524-276117 (Counterclockwise)
Preceding gene: 86360988
Following gene: 86360985
Centisome position: 43.04
GC content: 61.52
Gene sequence:
>408_bases ATGCCGCGCCGCAAGAACACAGTGGGGACGACGCTCGACACCGAGGGAGCCAAGATCGGCGAGCCGGTTCCGAAAGGGAT CGTCGATATCAACACCGCCGCTGTCGGGGTTCCCCGCCAGGCCGAGGACGATTTGCGCACAGAATTGAGCGCTCTGCGGC AACAGGTTGATAGGCTACAGCAACAGGTCATCAGTGCCGGGCGATCGGCGAAAGTTGGCGCCGGAAAGGCGGTCCTCGAG ACCGAGGCTCTGGTGAAACATTATCCGCTCTCAACGTTCGTTCTTATGGCTGCTATCGCGGGTTTGTCGGTGTTTGCATC ACGCCAGCTCTCCTCGCCGCGCCAGCGTGGACCGTCGGCCTTGCGCGATCTCAGGGATTTCTACGACAGGATGCGCGAGC GGATCTGA
Upstream 100 bases:
>100_bases GGAGATCTACATTATCCGGCCCGACCGGAGCTTGCTGATCGCCGAGCGCCATTACCGACCGGTTTTTTTGCTCGACGACG ACTAGGAAGGAGACCTGATC
Downstream 100 bases:
>100_bases CAAGATTTTAGGATTGCCAGCATCCCGATTCTGCCCGACTCTCAGTCAGGCAAGGAGGGACATGGATGCTCGACGTCCTT ATACGAAGCGCTCTCGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MPRRKNTVGTTLDTEGAKIGEPVPKGIVDINTAAVGVPRQAEDDLRTELSALRQQVDRLQQQVISAGRSAKVGAGKAVLE TEALVKHYPLSTFVLMAAIAGLSVFASRQLSSPRQRGPSALRDLRDFYDRMRERI
Sequences:
>Translated_135_residues MPRRKNTVGTTLDTEGAKIGEPVPKGIVDINTAAVGVPRQAEDDLRTELSALRQQVDRLQQQVISAGRSAKVGAGKAVLE TEALVKHYPLSTFVLMAAIAGLSVFASRQLSSPRQRGPSALRDLRDFYDRMRERI >Mature_134_residues PRRKNTVGTTLDTEGAKIGEPVPKGIVDINTAAVGVPRQAEDDLRTELSALRQQVDRLQQQVISAGRSAKVGAGKAVLET EALVKHYPLSTFVLMAAIAGLSVFASRQLSSPRQRGPSALRDLRDFYDRMRERI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14755; Mature: 14624
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRKNTVGTTLDTEGAKIGEPVPKGIVDINTAAVGVPRQAEDDLRTELSALRQQVDRLQ CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH QQVISAGRSAKVGAGKAVLETEALVKHYPLSTFVLMAAIAGLSVFASRQLSSPRQRGPSA HHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHH LRDLRDFYDRMRERI HHHHHHHHHHHHHCC >Mature Secondary Structure PRRKNTVGTTLDTEGAKIGEPVPKGIVDINTAAVGVPRQAEDDLRTELSALRQQVDRLQ CCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH QQVISAGRSAKVGAGKAVLETEALVKHYPLSTFVLMAAIAGLSVFASRQLSSPRQRGPSA HHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHH LRDLRDFYDRMRERI HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA