Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is glnH
Identifier: 86360985
GI number: 86360985
Start: 273042
End: 273869
Strand: Reverse
Name: glnH
Synonym: RHE_PF00255
Alternate gene names: 86360985
Gene position: 273869-273042 (Counterclockwise)
Preceding gene: 86360987
Following gene: 86360984
Centisome position: 42.62
GC content: 59.78
Gene sequence:
>828_bases ATGAAGATTTTTGAATCACTGCCGGCAGTCATTGCGCCTCTGCAAGCCGGCCTCGCGGCTTGCTTTCTGGCGATGGGAGC GGGTTTCGCAGCGGCGGCCGACAATCCCTATAATCTGATCGAGCCCGACGTCATCAGTGTCGGCACGATGGGCGATGCCA AGCCCTATACATTTGCGACCGCGGATGGCCAGTTCACCGGTTTCGACATCGAACTATTTCTCAACGTCGTGTCTCGTCTC GGCTTTGCAAAGGACAAGGTGACGTTCACCGGCCAGGAATTTTCTGCGCTCCTGCCATCGGTTGCAAACGAGCGGTTCGA CGTTGCCGTCGCTGCGATCGGAACCACCGAAGCCCGCGAGAAGACCGTCGATTTCTCCGACGGCTATCTCGCCGGTTATC TGTCCGTGCTGACGCCGGACGCGGCCATCAAGGACGCGGCCGGGCTGAAGGGCAAGCGGCTCGGCGTCGTGCAGGGAACC TTGCAGGAAGTCTACGCCGCCAAGAATTTTGGCGAGACCGATCTCGTGAAATTTCCCGACAACAATTCCGCCGTCGCCGC ACTCAACAACGGCACGATCGACGCGCATTTCCTCGACTACGAAGCGGCCAAGCAATATGGCGAGCGCTATCCCGCGCTGA AGGTCGCCGTCAACATTCCGTCCTTCGATGCGCCGGCGGGCTTCGTGGTCAGGCAGGGAAACGATGCCTTCCGCACGGCG TTGAACGGCGCCCTTCATGACGCGATGCAGGACGGCACCTGGAAGACGCTCTATGAGAAGTGGTTCCCCGGCTCACCGAT GCCGGATCAATATCTCCCCAAGAAATGA
Upstream 100 bases:
>100_bases AGACCGGTATCATTGCGGGCCGACTTGCCGCGAAACGGCGGCAGGGGCGGATAAACAGCTAATGCCGACAAGAGCATTCC TTCCGGAGCGGAGAACGAAC
Downstream 100 bases:
>100_bases GCCTACGGCCGTCCGCCGACCGCGGACGGCCGAGTCTCGGCGGTTGGCGTACCCGGCAAGGGTTTCATGGGGATCCCGAT GAACTGGATAGACAATCTGC
Product: glutamine ABC transporter, substrate binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKIFESLPAVIAPLQAGLAACFLAMGAGFAAAADNPYNLIEPDVISVGTMGDAKPYTFATADGQFTGFDIELFLNVVSRL GFAKDKVTFTGQEFSALLPSVANERFDVAVAAIGTTEAREKTVDFSDGYLAGYLSVLTPDAAIKDAAGLKGKRLGVVQGT LQEVYAAKNFGETDLVKFPDNNSAVAALNNGTIDAHFLDYEAAKQYGERYPALKVAVNIPSFDAPAGFVVRQGNDAFRTA LNGALHDAMQDGTWKTLYEKWFPGSPMPDQYLPKK
Sequences:
>Translated_275_residues MKIFESLPAVIAPLQAGLAACFLAMGAGFAAAADNPYNLIEPDVISVGTMGDAKPYTFATADGQFTGFDIELFLNVVSRL GFAKDKVTFTGQEFSALLPSVANERFDVAVAAIGTTEAREKTVDFSDGYLAGYLSVLTPDAAIKDAAGLKGKRLGVVQGT LQEVYAAKNFGETDLVKFPDNNSAVAALNNGTIDAHFLDYEAAKQYGERYPALKVAVNIPSFDAPAGFVVRQGNDAFRTA LNGALHDAMQDGTWKTLYEKWFPGSPMPDQYLPKK >Mature_275_residues MKIFESLPAVIAPLQAGLAACFLAMGAGFAAAADNPYNLIEPDVISVGTMGDAKPYTFATADGQFTGFDIELFLNVVSRL GFAKDKVTFTGQEFSALLPSVANERFDVAVAAIGTTEAREKTVDFSDGYLAGYLSVLTPDAAIKDAAGLKGKRLGVVQGT LQEVYAAKNFGETDLVKFPDNNSAVAALNNGTIDAHFLDYEAAKQYGERYPALKVAVNIPSFDAPAGFVVRQGNDAFRTA LNGALHDAMQDGTWKTLYEKWFPGSPMPDQYLPKK
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=223, Percent_Identity=30.0448430493274, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1788228, Length=252, Percent_Identity=28.968253968254, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI1787088, Length=243, Percent_Identity=28.3950617283951, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788648, Length=235, Percent_Identity=28.936170212766, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1788649, Length=253, Percent_Identity=28.0632411067194, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1787031, Length=219, Percent_Identity=28.7671232876712, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 29386; Mature: 29386
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFESLPAVIAPLQAGLAACFLAMGAGFAAAADNPYNLIEPDVISVGTMGDAKPYTFAT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEECCCCCCCCCEEEE ADGQFTGFDIELFLNVVSRLGFAKDKVTFTGQEFSALLPSVANERFDVAVAAIGTTEARE CCCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHCCCCEEEEEEEECCCHHHH KTVDFSDGYLAGYLSVLTPDAAIKDAAGLKGKRLGVVQGTLQEVYAAKNFGETDLVKFPD HCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCCEEECCC NNSAVAALNNGTIDAHFLDYEAAKQYGERYPALKVAVNIPSFDAPAGFVVRQGNDAFRTA CCCEEEEECCCEEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCHHHHHH LNGALHDAMQDGTWKTLYEKWFPGSPMPDQYLPKK HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKIFESLPAVIAPLQAGLAACFLAMGAGFAAAADNPYNLIEPDVISVGTMGDAKPYTFAT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEECCCCCCCCCEEEE ADGQFTGFDIELFLNVVSRLGFAKDKVTFTGQEFSALLPSVANERFDVAVAAIGTTEARE CCCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHCCCCEEEEEEEECCCHHHH KTVDFSDGYLAGYLSVLTPDAAIKDAAGLKGKRLGVVQGTLQEVYAAKNFGETDLVKFPD HCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCCEEECCC NNSAVAALNNGTIDAHFLDYEAAKQYGERYPALKVAVNIPSFDAPAGFVVRQGNDAFRTA CCCEEEEECCCEEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEECCCHHHHHH LNGALHDAMQDGTWKTLYEKWFPGSPMPDQYLPKK HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]