Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360950
Identifier: 86360950
GI number: 86360950
Start: 233212
End: 233445
Strand: Reverse
Name: 86360950
Synonym: RHE_PF00220
Alternate gene names: NA
Gene position: 233445-233212 (Counterclockwise)
Preceding gene: 86360951
Following gene: 86360948
Centisome position: 36.33
GC content: 61.54
Gene sequence:
>234_bases ATGCCCACGACAGTTACCGCGAAAGGCCAAGTCACCAATTCGAAGCCCGTACGCAATATGCTCGGCATCGTTCCCGGCAG CCAAGTCGATTTTCACCGTGCTGCCGACGGAAGCGTGGTTCTGACGCGCGCCGACAAGAAACGACCTGCGAGCCGCTTCG AGAAGCTGCGCGGCCATGCCGGCAAGGGCCTCGACACGAACGCCATCATGGCTTTGACGCGCGGCGAAACGTGA
Upstream 100 bases:
>100_bases CCGACTGGCTCTACAAGTCGATGGCGGCTTAGTGCCCACTTTGAATTTTGCCGAATGTAGCAATACCTTCTGCCAAGAGA GTATTACAAAGGCGTCTGTT
Downstream 100 bases:
>100_bases CACTCGTCGATACCAATGTGCTCCTGGACCTCGTGCCAAACGACCCGGAATGGGCGGACTGGTCTATCGCCCAGCTCGAG ACGGCAAGTATAGAAGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MPTTVTAKGQVTNSKPVRNMLGIVPGSQVDFHRAADGSVVLTRADKKRPASRFEKLRGHAGKGLDTNAIMALTRGET
Sequences:
>Translated_77_residues MPTTVTAKGQVTNSKPVRNMLGIVPGSQVDFHRAADGSVVLTRADKKRPASRFEKLRGHAGKGLDTNAIMALTRGET >Mature_76_residues PTTVTAKGQVTNSKPVRNMLGIVPGSQVDFHRAADGSVVLTRADKKRPASRFEKLRGHAGKGLDTNAIMALTRGET
Specific function: Unknown
COG id: COG2002
COG function: function code K; Regulators of stationary/sporulation gene expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8217; Mature: 8085
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTVTAKGQVTNSKPVRNMLGIVPGSQVDFHRAADGSVVLTRADKKRPASRFEKLRGHA CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHCCC GKGLDTNAIMALTRGET CCCCCCCEEEEEECCCC >Mature Secondary Structure PTTVTAKGQVTNSKPVRNMLGIVPGSQVDFHRAADGSVVLTRADKKRPASRFEKLRGHA CCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCCHHHHHHHHCCC GKGLDTNAIMALTRGET CCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA