Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is thuE
Identifier: 86360941
GI number: 86360941
Start: 220709
End: 221974
Strand: Reverse
Name: thuE
Synonym: RHE_PF00210
Alternate gene names: 86360941
Gene position: 221974-220709 (Counterclockwise)
Preceding gene: 86360943
Following gene: 86360940
Centisome position: 34.55
GC content: 59.24
Gene sequence:
>1266_bases ATGAAAAAGTTTGCTTTAGGCTTGTCGGCGCTCGGCCTGGCCATCGCCATCGCTGGTTCGATCCATGCCGCCGAAATTTC ATTTGCCGCCAACACCACCGGGAAAAACGTCGAATTCCTCAATAAGCAGCTGGCGATTTTCGGGAAGGAGACCGGCAATC AGGTCAAACTCGTCACCATGCCCTCGTCGAGCAGCGAGCAGTTCTCCCAATATCGCCTGTGGCTAGCCGCCGGAAACAAG GACATCGACGTCTATCAGACCGACGTTATCTGGGCGCCGCAGCTTGCAGACCAGTTCATCGATCTGAAGGAAGCTACCAA AGATGTAGCAGGCCAGTTCTTCCCGTCGATCATTGCCTCGCAGACGGTCAACGGCCGACTGGTGGCGCTGCCGCTGTTTA CAGATGCTCCCGCGCTGTTTTACCGGAAGGACCTGCTTGAAAAATACGGCAAGCTGCCGCCAAAGACCTGGGACGAGATG GCCGCGACCGCCAAGGAAGTTCAGGATAAGGAACGCCAGGCCGGACAGAAGGACCTTTGGGGCTACGTCTTCCAGGGCAA CTCCTATGAAGGGCTGACCTGCAACGCGCTGGAATGGGTAAAGTCGTCGGGCGGCGGCCAGATTGTCGAGCCAGACGGGA CAATTTCGATCAACAACGAGAAGGCGGCGGCAGCGCTTGAACGCGCCAAGGGCTGGATCGGAACGATCTCACCGCCGGGC GTGCTCGCATATCAGGAAGAAGAATCGCGCGGTGTTTGGCAGACAGGCAACGCCGTCTTCATGCGCAACTGGCCCTATGC CTATGCCCTCGGCAATGGTGCCGACAGTGCCGTGAAGGGCAAGTTCGACGTGATGACGCTGCCGGTTGCGGCCGCCGGGG ACAAGCCATCCTCGACACTCGGCGGTTGGAACCTGGCGGTGTCGAAATATTCGGAAAAACAGGAAGCAGCCATCGCGCTC GTCAAATTCCTGGCGTCGAAGGACGTGCAAAAGGCGCGCGCCATCGAGCTGTCCAATCTGCCGACACTGACCGACCTTTA TGACGACAAGGATATTGCCGCCGCGCAGCCCTTCATGCCCAACTGGAAGCCTATTTTCCAGAACGCGGTGCCGCGTCCTT CGGCGACCGCCAAGGTCAAGTACAACGAAGTGTCCTCGAAGTTCTGGACGGCCGTGCACAACACGCTGTCCGGCAGCGGC TCGGCCGCCGAGAACCTCGAGCTTCTCGAAGCCGACCTGACGACCCTCAAGGGCGACGCCTGGTAA
Upstream 100 bases:
>100_bases TAACTCACAACTGTGAAGGGTTCATTTGGCGGCTTGACGCCCTTCAAGCCTTCTGCAATGTTCTGTTGTCCAAATCGATT TCAATTTCTGGGAGGAGATC
Downstream 100 bases:
>100_bases GAACCGGGCCGGCGGCTGTGAAGCCGCCGGCCCGGTTTCGGACGAGCAACCGGGGAGGCGTTTCATGACTGAAATCGTAG TTTCGCAAGCAGTTGAACCA
Product: trehalosemaltose ABC transporter, sugar-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MKKFALGLSALGLAIAIAGSIHAAEISFAANTTGKNVEFLNKQLAIFGKETGNQVKLVTMPSSSSEQFSQYRLWLAAGNK DIDVYQTDVIWAPQLADQFIDLKEATKDVAGQFFPSIIASQTVNGRLVALPLFTDAPALFYRKDLLEKYGKLPPKTWDEM AATAKEVQDKERQAGQKDLWGYVFQGNSYEGLTCNALEWVKSSGGGQIVEPDGTISINNEKAAAALERAKGWIGTISPPG VLAYQEEESRGVWQTGNAVFMRNWPYAYALGNGADSAVKGKFDVMTLPVAAAGDKPSSTLGGWNLAVSKYSEKQEAAIAL VKFLASKDVQKARAIELSNLPTLTDLYDDKDIAAAQPFMPNWKPIFQNAVPRPSATAKVKYNEVSSKFWTAVHNTLSGSG SAAENLELLEADLTTLKGDAW
Sequences:
>Translated_421_residues MKKFALGLSALGLAIAIAGSIHAAEISFAANTTGKNVEFLNKQLAIFGKETGNQVKLVTMPSSSSEQFSQYRLWLAAGNK DIDVYQTDVIWAPQLADQFIDLKEATKDVAGQFFPSIIASQTVNGRLVALPLFTDAPALFYRKDLLEKYGKLPPKTWDEM AATAKEVQDKERQAGQKDLWGYVFQGNSYEGLTCNALEWVKSSGGGQIVEPDGTISINNEKAAAALERAKGWIGTISPPG VLAYQEEESRGVWQTGNAVFMRNWPYAYALGNGADSAVKGKFDVMTLPVAAAGDKPSSTLGGWNLAVSKYSEKQEAAIAL VKFLASKDVQKARAIELSNLPTLTDLYDDKDIAAAQPFMPNWKPIFQNAVPRPSATAKVKYNEVSSKFWTAVHNTLSGSG SAAENLELLEADLTTLKGDAW >Mature_421_residues MKKFALGLSALGLAIAIAGSIHAAEISFAANTTGKNVEFLNKQLAIFGKETGNQVKLVTMPSSSSEQFSQYRLWLAAGNK DIDVYQTDVIWAPQLADQFIDLKEATKDVAGQFFPSIIASQTVNGRLVALPLFTDAPALFYRKDLLEKYGKLPPKTWDEM AATAKEVQDKERQAGQKDLWGYVFQGNSYEGLTCNALEWVKSSGGGQIVEPDGTISINNEKAAAALERAKGWIGTISPPG VLAYQEEESRGVWQTGNAVFMRNWPYAYALGNGADSAVKGKFDVMTLPVAAAGDKPSSTLGGWNLAVSKYSEKQEAAIAL VKFLASKDVQKARAIELSNLPTLTDLYDDKDIAAAQPFMPNWKPIFQNAVPRPSATAKVKYNEVSSKFWTAVHNTLSGSG SAAENLELLEADLTTLKGDAW
Specific function: Probably part of a binding-protein-dependent transport system [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 45603; Mature: 45603
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFALGLSALGLAIAIAGSIHAAEISFAANTTGKNVEFLNKQLAIFGKETGNQVKLVTM CCCHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHEEEEEECCCCCEEEEEEC PSSSSEQFSQYRLWLAAGNKDIDVYQTDVIWAPQLADQFIDLKEATKDVAGQFFPSIIAS CCCCHHHHHHEEEEEEECCCCCEEEEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTVNGRLVALPLFTDAPALFYRKDLLEKYGKLPPKTWDEMAATAKEVQDKERQAGQKDLW CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC GYVFQGNSYEGLTCNALEWVKSSGGGQIVEPDGTISINNEKAAAALERAKGWIGTISPPG EEEEECCCCCCEECHHHHHHHCCCCCEEECCCCEEEECCHHHHHHHHHHCCCEECCCCCC VLAYQEEESRGVWQTGNAVFMRNWPYAYALGNGADSAVKGKFDVMTLPVAAAGDKPSSTL EEEEECCCCCCCEECCCEEEEECCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCC GGWNLAVSKYSEKQEAAIALVKFLASKDVQKARAIELSNLPTLTDLYDDKDIAAAQPFMP CCEEEEEHHHCHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCHHHHCCCCCCCCCCCCCC NWKPIFQNAVPRPSATAKVKYNEVSSKFWTAVHNTLSGSGSAAENLELLEADLTTLKGDA CCHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC W C >Mature Secondary Structure MKKFALGLSALGLAIAIAGSIHAAEISFAANTTGKNVEFLNKQLAIFGKETGNQVKLVTM CCCHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHHHHEEEEEECCCCCEEEEEEC PSSSSEQFSQYRLWLAAGNKDIDVYQTDVIWAPQLADQFIDLKEATKDVAGQFFPSIIAS CCCCHHHHHHEEEEEEECCCCCEEEEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTVNGRLVALPLFTDAPALFYRKDLLEKYGKLPPKTWDEMAATAKEVQDKERQAGQKDLW CCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC GYVFQGNSYEGLTCNALEWVKSSGGGQIVEPDGTISINNEKAAAALERAKGWIGTISPPG EEEEECCCCCCEECHHHHHHHCCCCCEEECCCCEEEECCHHHHHHHHHHCCCEECCCCCC VLAYQEEESRGVWQTGNAVFMRNWPYAYALGNGADSAVKGKFDVMTLPVAAAGDKPSSTL EEEEECCCCCCCEECCCEEEEECCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCC GGWNLAVSKYSEKQEAAIALVKFLASKDVQKARAIELSNLPTLTDLYDDKDIAAAQPFMP CCEEEEEHHHCHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCHHHHCCCCCCCCCCCCCC NWKPIFQNAVPRPSATAKVKYNEVSSKFWTAVHNTLSGSGSAAENLELLEADLTTLKGDA CCHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC W C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]