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The map label for this gene is fliY [C]

Identifier: 86360923

GI number: 86360923

Start: 201882

End: 202715

Strand: Reverse

Name: fliY [C]

Synonym: RHE_PF00192

Alternate gene names: 86360923

Gene position: 202715-201882 (Counterclockwise)

Preceding gene: 86360924

Following gene: 86360922

Centisome position: 31.55

GC content: 59.95

Gene sequence:

>834_bases
ATGAACAGATTGACCAAGATGACTGCAGCCGCCGCGTCGCTCGCTATTGTGCTGGCTGCCGTTCCGGCCAATGCCGGCGC
CGTGCTCGACCGCGTGATGGCGGACAAGGACCTGAAGGTTGCGACCGACGCCAACTGGGCGCCGCAATCCTTCATGAACG
ACAAGAACGAACTTGACGGTTTCGACATCGACGTTGCCAAGGATATCGGCAGGCGTCTCGGTGTGAAGGTCGAATTCGTA
ACGCCCGGCTGGGACATCATCACAGCCGGCAATTGGGCGGGCCGCTGGGACATGCATGTCGGTTCGATGACGCCGACCAA
AAAGCGTGCCGAGATCTTTGACTTCCCGGCCGTTTATTATTACACGCCGGCTGCTGTCGCCGCGCACAAGGACAGCAAGG
CGACGAAGCTCTCCGATCTTGACGGCAAGGTCGTCGGGACCACGGCCACCTCCACGTTCGAAGCCTATGCGAAAGGCGAC
TTGACGCTTGATGCCGCCGGCGCGCCTGCCTTCAAGTACGAGTTCAAGCCGAAGGAAGTGAAGTCCTACGCCAACTCGTC
CACCGCCTTCGATGATCTGCGTCTCGGCGACGGCACCCGTCTCGATGCCGTCGTCTCGTCGCTGCCGAGCATTCTCGACG
CCGTCAAGGCCGGTTACCCGATCAAGCAGATCGGCGACCCCGTCTTCTACGAGCCGCTTGCCGTTGCCATCGAGCATGGC
GACAAGGAATTCAACGACAAGATCGCCGAAGCCGTGAAGGCCATGCAGGCGGATGGCACGCTGAGCAAGCTTTCCGTGAA
GTGGTATGGCGTAGATTATACGGTCGTAAAGTAA

Upstream 100 bases:

>100_bases
ATCGCCGGAAGACGAAAAGTCTCTTCGACTGCAAGATTGCATGACGGTACGGGAATGAGCCCGGACCAAAACCAAGAATG
ACAATAAAGGGAACCATCGC

Downstream 100 bases:

>100_bases
CCACCGCCAGAAGCGGGCGGTCCGAGCAACCGGACCGTCGATTTGCCGCAAGGGACAAGAGATGCTTTATCCCGATACCG
TCGAGTCTGAAGTGCTCGTC

Product: amino acid ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNRLTKMTAAAASLAIVLAAVPANAGAVLDRVMADKDLKVATDANWAPQSFMNDKNELDGFDIDVAKDIGRRLGVKVEFV
TPGWDIITAGNWAGRWDMHVGSMTPTKKRAEIFDFPAVYYYTPAAVAAHKDSKATKLSDLDGKVVGTTATSTFEAYAKGD
LTLDAAGAPAFKYEFKPKEVKSYANSSTAFDDLRLGDGTRLDAVVSSLPSILDAVKAGYPIKQIGDPVFYEPLAVAIEHG
DKEFNDKIAEAVKAMQADGTLSKLSVKWYGVDYTVVK

Sequences:

>Translated_277_residues
MNRLTKMTAAAASLAIVLAAVPANAGAVLDRVMADKDLKVATDANWAPQSFMNDKNELDGFDIDVAKDIGRRLGVKVEFV
TPGWDIITAGNWAGRWDMHVGSMTPTKKRAEIFDFPAVYYYTPAAVAAHKDSKATKLSDLDGKVVGTTATSTFEAYAKGD
LTLDAAGAPAFKYEFKPKEVKSYANSSTAFDDLRLGDGTRLDAVVSSLPSILDAVKAGYPIKQIGDPVFYEPLAVAIEHG
DKEFNDKIAEAVKAMQADGTLSKLSVKWYGVDYTVVK
>Mature_277_residues
MNRLTKMTAAAASLAIVLAAVPANAGAVLDRVMADKDLKVATDANWAPQSFMNDKNELDGFDIDVAKDIGRRLGVKVEFV
TPGWDIITAGNWAGRWDMHVGSMTPTKKRAEIFDFPAVYYYTPAAVAAHKDSKATKLSDLDGKVVGTTATSTFEAYAKGD
LTLDAAGAPAFKYEFKPKEVKSYANSSTAFDDLRLGDGTRLDAVVSSLPSILDAVKAGYPIKQIGDPVFYEPLAVAIEHG
DKEFNDKIAEAVKAMQADGTLSKLSVKWYGVDYTVVK

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=251, Percent_Identity=26.2948207171315, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787031, Length=277, Percent_Identity=29.2418772563177, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787085, Length=243, Percent_Identity=26.3374485596708, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788648, Length=246, Percent_Identity=26.4227642276423, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788649, Length=249, Percent_Identity=27.3092369477912, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1787088, Length=243, Percent_Identity=23.0452674897119, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 29826; Mature: 29826

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLTKMTAAAASLAIVLAAVPANAGAVLDRVMADKDLKVATDANWAPQSFMNDKNELDG
CCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCHHCCC
FDIDVAKDIGRRLGVKVEFVTPGWDIITAGNWAGRWDMHVGSMTPTKKRAEIFDFPAVYY
CCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEECCCCCCCHHHHHCCCCEEEE
YTPAAVAAHKDSKATKLSDLDGKVVGTTATSTFEAYAKGDLTLDAAGAPAFKYEFKPKEV
ECCHHHEECCCCCCCEECCCCCEEEEECCCHHHHHHHCCCEEEECCCCCEEEECCCHHHH
KSYANSSTAFDDLRLGDGTRLDAVVSSLPSILDAVKAGYPIKQIGDPVFYEPLAVAIEHG
HHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHEEECCC
DKEFNDKIAEAVKAMQADGTLSKLSVKWYGVDYTVVK
CHHHHHHHHHHHHHHHCCCCEEEEEEEEEECEEEEEC
>Mature Secondary Structure
MNRLTKMTAAAASLAIVLAAVPANAGAVLDRVMADKDLKVATDANWAPQSFMNDKNELDG
CCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCHHCCC
FDIDVAKDIGRRLGVKVEFVTPGWDIITAGNWAGRWDMHVGSMTPTKKRAEIFDFPAVYY
CCCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCEEEEEECCCCCCCHHHHHCCCCEEEE
YTPAAVAAHKDSKATKLSDLDGKVVGTTATSTFEAYAKGDLTLDAAGAPAFKYEFKPKEV
ECCHHHEECCCCCCCEECCCCCEEEEECCCHHHHHHHCCCEEEECCCCCEEEECCCHHHH
KSYANSSTAFDDLRLGDGTRLDAVVSSLPSILDAVKAGYPIKQIGDPVFYEPLAVAIEHG
HHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHEEECCC
DKEFNDKIAEAVKAMQADGTLSKLSVKWYGVDYTVVK
CHHHHHHHHHHHHHHHCCCCEEEEEEEEEECEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]