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The map label for this gene is yecS [C]

Identifier: 86360915

GI number: 86360915

Start: 194735

End: 195361

Strand: Reverse

Name: yecS [C]

Synonym: RHE_PF00184

Alternate gene names: 86360915

Gene position: 195361-194735 (Counterclockwise)

Preceding gene: 86360916

Following gene: 86360914

Centisome position: 30.41

GC content: 60.61

Gene sequence:

>627_bases
ATGCCGACCCTTCTCGAAGGGTTCAAGATCACTATTCTTGCCACCATCCTCGGCGCTGCGGTCGCCATGGTTGTTGGCCT
CGGCCTCGCCATTGCGCGGCGATCCCCGGTCGCCGCCATTTCCCGGACGGTCGGCTTCGTCTCGGAATTCATTCGCGGGA
CACCGCTGCTGGTACAGCTCTACTTCATCTTTTATGTGCTGCCCGATATCGGCATCCGGCTGTCGCCGCTCACCGCCGGC
GTCATCGGCATCGGCATTCACTACGCCACCTATACCGCGGAGGTCTATCGCGCCGGCATCGAAAACGTCTCGCGCGGACA
ATGGGAAGCGGCCAAGGCGACCAATCTGACGACGCGCCAGGCCTGGATCCACGTAATCTTGCCGCAGGCGATCCCGCCGA
TGATCCCGGCGCTTGCCAATTATTTCATCGCCATGTTCAAGGAAACGCCGCTGCTTTCGGCGATCACCGTGCTGGAATTG
ATGAACCAGGCCAAAAGCATCGCCAACAGCAACTATCGCTACATCGAACCGATGACGCTCGTCGGCGTCTTCTTCCTCGT
CATCAGCCTGGTCTCGGTGGTGGGCTTGCGCTGGCTCGAGGAGCGCTACGCCAGGATGGATGACTGA

Upstream 100 bases:

>100_bases
TCGGCGGCAATGCGCCTGCTGGAGCGGCGGATGACACGCGGCCTCGACGGCATGAGGACCTGATCATATGGAATGGGATT
GGGAGTTCGTCTGGCAGATC

Downstream 100 bases:

>100_bases
GATGCCCGCAGCAATCGAAATCATTGCCGCCGGCCGGCGGCCACGGCTGGACGACCGGCCGCTCGAAAAGCGCATCGGCC
TGATCATCCTGGCGACGGAT

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MPTLLEGFKITILATILGAAVAMVVGLGLAIARRSPVAAISRTVGFVSEFIRGTPLLVQLYFIFYVLPDIGIRLSPLTAG
VIGIGIHYATYTAEVYRAGIENVSRGQWEAAKATNLTTRQAWIHVILPQAIPPMIPALANYFIAMFKETPLLSAITVLEL
MNQAKSIANSNYRYIEPMTLVGVFFLVISLVSVVGLRWLEERYARMDD

Sequences:

>Translated_208_residues
MPTLLEGFKITILATILGAAVAMVVGLGLAIARRSPVAAISRTVGFVSEFIRGTPLLVQLYFIFYVLPDIGIRLSPLTAG
VIGIGIHYATYTAEVYRAGIENVSRGQWEAAKATNLTTRQAWIHVILPQAIPPMIPALANYFIAMFKETPLLSAITVLEL
MNQAKSIANSNYRYIEPMTLVGVFFLVISLVSVVGLRWLEERYARMDD
>Mature_207_residues
PTLLEGFKITILATILGAAVAMVVGLGLAIARRSPVAAISRTVGFVSEFIRGTPLLVQLYFIFYVLPDIGIRLSPLTAGV
IGIGIHYATYTAEVYRAGIENVSRGQWEAAKATNLTTRQAWIHVILPQAIPPMIPALANYFIAMFKETPLLSAITVLELM
NQAKSIANSNYRYIEPMTLVGVFFLVISLVSVVGLRWLEERYARMDD

Specific function: Probably part of the binding-protein-dependent transport system y4tEFGH for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=169, Percent_Identity=39.0532544378698, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1787030, Length=205, Percent_Identity=39.0243902439024, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=28.7735849056604, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=29.1479820627803, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1788645, Length=207, Percent_Identity=29.951690821256, Blast_Score=79, Evalue=1e-16,
Organism=Escherichia coli, GI87082239, Length=163, Percent_Identity=32.5153374233129, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788646, Length=216, Percent_Identity=27.7777777777778, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786874, Length=197, Percent_Identity=26.9035532994924, Blast_Score=71, Evalue=4e-14,
Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=24.2990654205607, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI48994930, Length=204, Percent_Identity=28.921568627451, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515
- InterPro:   IPR014341 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 22859; Mature: 22728

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLLEGFKITILATILGAAVAMVVGLGLAIARRSPVAAISRTVGFVSEFIRGTPLLVQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH
YFIFYVLPDIGIRLSPLTAGVIGIGIHYATYTAEVYRAGIENVSRGQWEAAKATNLTTRQ
HHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHH
AWIHVILPQAIPPMIPALANYFIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTL
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECHHHH
VGVFFLVISLVSVVGLRWLEERYARMDD
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PTLLEGFKITILATILGAAVAMVVGLGLAIARRSPVAAISRTVGFVSEFIRGTPLLVQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH
YFIFYVLPDIGIRLSPLTAGVIGIGIHYATYTAEVYRAGIENVSRGQWEAAKATNLTTRQ
HHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHH
AWIHVILPQAIPPMIPALANYFIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTL
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECHHHH
VGVFFLVISLVSVVGLRWLEERYARMDD
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]