Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360797

Identifier: 86360797

GI number: 86360797

Start: 62889

End: 63260

Strand: Reverse

Name: 86360797

Synonym: RHE_PF00063

Alternate gene names: NA

Gene position: 63260-62889 (Counterclockwise)

Preceding gene: 86360799

Following gene: 86360796

Centisome position: 9.85

GC content: 56.72

Gene sequence:

>372_bases
ATGAAATCGCTCAGCCCGATTGCCGGCAAGACGATCCTTATCATCGGTGAGGCCGGCTTCCTTTCGGACGATGCGAGAAA
GGCATTTGTCGCGCTAAAGGCTGTGCTTGCCGGTCCTGTCGTCGTTTCCAGCGCGATGGAATGTTTGAGCGAGGGCCTCT
TGTTCGATGCCGTGATCATCGACGTGACGATTTCCGACGAAGCCATGCTCTGGATGAACGAATGGCTGGAGACGCGCCGA
ATTCCTTTCATCTTTGCCCATAGCGAGCGGTCTGAAACACCGCCCGGCGGCTTTGTCGTCAGCGGGCGTCCTTCCGATAT
CGACGCGATGATCGCCGCTCTGTTTGGAGCAGACCCGTCCTATTATCACTAG

Upstream 100 bases:

>100_bases
AATCGGGTAGGCACGGTGCAGGCGCGGACCGCCTGATGCTTCGAACCGCCGTTGAACAGCATGATCACCCTAAAGCCAGG
ATTACATTAGGCAGTTCGCC

Downstream 100 bases:

>100_bases
AACGCCATGTGTCCGTTCGGATGCACAAAGGACGTGCTAACGATTCTGATTTTCGGGCCGATACTATAGCACTTTGGGTC
GACTGTTCAGTTCCGTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MKSLSPIAGKTILIIGEAGFLSDDARKAFVALKAVLAGPVVVSSAMECLSEGLLFDAVIIDVTISDEAMLWMNEWLETRR
IPFIFAHSERSETPPGGFVVSGRPSDIDAMIAALFGADPSYYH

Sequences:

>Translated_123_residues
MKSLSPIAGKTILIIGEAGFLSDDARKAFVALKAVLAGPVVVSSAMECLSEGLLFDAVIIDVTISDEAMLWMNEWLETRR
IPFIFAHSERSETPPGGFVVSGRPSDIDAMIAALFGADPSYYH
>Mature_123_residues
MKSLSPIAGKTILIIGEAGFLSDDARKAFVALKAVLAGPVVVSSAMECLSEGLLFDAVIIDVTISDEAMLWMNEWLETRR
IPFIFAHSERSETPPGGFVVSGRPSDIDAMIAALFGADPSYYH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13232; Mature: 13232

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLSPIAGKTILIIGEAGFLSDDARKAFVALKAVLAGPVVVSSAMECLSEGLLFDAVII
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEEEE
DVTISDEAMLWMNEWLETRRIPFIFAHSERSETPPGGFVVSGRPSDIDAMIAALFGADPS
EEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCC
YYH
CCC
>Mature Secondary Structure
MKSLSPIAGKTILIIGEAGFLSDDARKAFVALKAVLAGPVVVSSAMECLSEGLLFDAVII
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEEEE
DVTISDEAMLWMNEWLETRRIPFIFAHSERSETPPGGFVVSGRPSDIDAMIAALFGADPS
EEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCC
YYH
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA