Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360797
Identifier: 86360797
GI number: 86360797
Start: 62889
End: 63260
Strand: Reverse
Name: 86360797
Synonym: RHE_PF00063
Alternate gene names: NA
Gene position: 63260-62889 (Counterclockwise)
Preceding gene: 86360799
Following gene: 86360796
Centisome position: 9.85
GC content: 56.72
Gene sequence:
>372_bases ATGAAATCGCTCAGCCCGATTGCCGGCAAGACGATCCTTATCATCGGTGAGGCCGGCTTCCTTTCGGACGATGCGAGAAA GGCATTTGTCGCGCTAAAGGCTGTGCTTGCCGGTCCTGTCGTCGTTTCCAGCGCGATGGAATGTTTGAGCGAGGGCCTCT TGTTCGATGCCGTGATCATCGACGTGACGATTTCCGACGAAGCCATGCTCTGGATGAACGAATGGCTGGAGACGCGCCGA ATTCCTTTCATCTTTGCCCATAGCGAGCGGTCTGAAACACCGCCCGGCGGCTTTGTCGTCAGCGGGCGTCCTTCCGATAT CGACGCGATGATCGCCGCTCTGTTTGGAGCAGACCCGTCCTATTATCACTAG
Upstream 100 bases:
>100_bases AATCGGGTAGGCACGGTGCAGGCGCGGACCGCCTGATGCTTCGAACCGCCGTTGAACAGCATGATCACCCTAAAGCCAGG ATTACATTAGGCAGTTCGCC
Downstream 100 bases:
>100_bases AACGCCATGTGTCCGTTCGGATGCACAAAGGACGTGCTAACGATTCTGATTTTCGGGCCGATACTATAGCACTTTGGGTC GACTGTTCAGTTCCGTACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKSLSPIAGKTILIIGEAGFLSDDARKAFVALKAVLAGPVVVSSAMECLSEGLLFDAVIIDVTISDEAMLWMNEWLETRR IPFIFAHSERSETPPGGFVVSGRPSDIDAMIAALFGADPSYYH
Sequences:
>Translated_123_residues MKSLSPIAGKTILIIGEAGFLSDDARKAFVALKAVLAGPVVVSSAMECLSEGLLFDAVIIDVTISDEAMLWMNEWLETRR IPFIFAHSERSETPPGGFVVSGRPSDIDAMIAALFGADPSYYH >Mature_123_residues MKSLSPIAGKTILIIGEAGFLSDDARKAFVALKAVLAGPVVVSSAMECLSEGLLFDAVIIDVTISDEAMLWMNEWLETRR IPFIFAHSERSETPPGGFVVSGRPSDIDAMIAALFGADPSYYH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13232; Mature: 13232
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLSPIAGKTILIIGEAGFLSDDARKAFVALKAVLAGPVVVSSAMECLSEGLLFDAVII CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEEEE DVTISDEAMLWMNEWLETRRIPFIFAHSERSETPPGGFVVSGRPSDIDAMIAALFGADPS EEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCC YYH CCC >Mature Secondary Structure MKSLSPIAGKTILIIGEAGFLSDDARKAFVALKAVLAGPVVVSSAMECLSEGLLFDAVII CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEEEE DVTISDEAMLWMNEWLETRRIPFIFAHSERSETPPGGFVVSGRPSDIDAMIAALFGADPS EEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCC YYH CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA