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The map label for this gene is rbsC [H]

Identifier: 86360768

GI number: 86360768

Start: 35164

End: 36162

Strand: Reverse

Name: rbsC [H]

Synonym: RHE_PF00034

Alternate gene names: 86360768

Gene position: 36162-35164 (Counterclockwise)

Preceding gene: 86360769

Following gene: 86360767

Centisome position: 5.63

GC content: 62.16

Gene sequence:

>999_bases
ATGAAGCTCAGGACGTTCATCGCCCTCTTCGCTGTCATCATCTTCTTTGCGCTCTTCGCGCCGAACTTCACCTCGACGGC
GAACATGATCCTGATGTCGAAGCATGTGGCGCTGAACGCCTTCCTCGCCATGGGCATGACCTTCGTCATCATCACCGGCG
GCATCGACCTTTCAGTCGGCTCGATCGTCGGGCTCTGCGGCATGGTCGCCGGCGGGCTGATCCTCTACGGCATCGAGCTG
CCGATCGGCTACACCATCTATTTCAACCTATTTGAGATCGTGCTGATCACGCTGTCGATCGGCCTTGTTATCGGCCTCGT
CAACGGTCTCCTGATCACCAAGCTCAACGTCGCGCCCTTCATCGCCACGCTCGGGACGCTCTATATCGCCCGCGGCCTGG
CGCTGCTGTCGTCGGATGGACAGACCTTTCCGAACCTCGTCGGCCGGCCGGAATATGCCACCACCGGATTCGATTTCTTC
GGCGCGGGACGCATTCTCGGCCTGCCGGTGTCGATCTGGATCCTGATCGTACTGGCGCTCGCAGCCGCCTATGTCGCCCG
CTCGACGCCGATCGGCCGCCACATCTTTGCCGTCGGCGGCAATGAGCGGGCGGCGCGCATGTCCGGCATTCGCGTCGATG
TCGTGAAAATCTTCGTCTATATGTTTTCCGGCCTTTGCGCGGCAATCGTCGGCGTCGTCATCTCCTCGGAGCTGATGGCC
GCCCATCCGGCGACTGGCGAAAGCTTCGAGCTCAACGCGATCGCCGCAGCCGTGCTCGGCGGCACCTCGATGTCGGGCGG
GCGCGGCACGATCGGCGGCACGATCATCGGCGCCTTTGTCATCGGCATTCTCTCCGACGGGCTTGTCATGATGGGCGTTT
CCTCCTTCTGGCAGATGGTCATCAAGGGCCTCGTGATCATCATCGCCGTGGTCGTCGACCAGGCGCAGCGCCGCCTGCAG
CAGCGCGTCACCCTAATGCAGATGGCAAAGGCAGGTTGA

Upstream 100 bases:

>100_bases
CGGCCAAGGGACACGGACATCAAGGGAAACTCGCGTCATGATGGCGGCTACTTCAACTCTTGCGCCGAAGGGCGCCAACG
GCTCGGCGCTCCTGACGCTG

Downstream 100 bases:

>100_bases
AATGACCGGATTGAAAGGCGCGTTGATCGGCTGCGGCTTCTTTGCGATCAACCAGATGCATGCCTGGAAGGATGTCGACG
GCGCCGGCATCGTCGCGATC

Product: ribose ABC transporter permease

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MKLRTFIALFAVIIFFALFAPNFTSTANMILMSKHVALNAFLAMGMTFVIITGGIDLSVGSIVGLCGMVAGGLILYGIEL
PIGYTIYFNLFEIVLITLSIGLVIGLVNGLLITKLNVAPFIATLGTLYIARGLALLSSDGQTFPNLVGRPEYATTGFDFF
GAGRILGLPVSIWILIVLALAAAYVARSTPIGRHIFAVGGNERAARMSGIRVDVVKIFVYMFSGLCAAIVGVVISSELMA
AHPATGESFELNAIAAAVLGGTSMSGGRGTIGGTIIGAFVIGILSDGLVMMGVSSFWQMVIKGLVIIIAVVVDQAQRRLQ
QRVTLMQMAKAG

Sequences:

>Translated_332_residues
MKLRTFIALFAVIIFFALFAPNFTSTANMILMSKHVALNAFLAMGMTFVIITGGIDLSVGSIVGLCGMVAGGLILYGIEL
PIGYTIYFNLFEIVLITLSIGLVIGLVNGLLITKLNVAPFIATLGTLYIARGLALLSSDGQTFPNLVGRPEYATTGFDFF
GAGRILGLPVSIWILIVLALAAAYVARSTPIGRHIFAVGGNERAARMSGIRVDVVKIFVYMFSGLCAAIVGVVISSELMA
AHPATGESFELNAIAAAVLGGTSMSGGRGTIGGTIIGAFVIGILSDGLVMMGVSSFWQMVIKGLVIIIAVVVDQAQRRLQ
QRVTLMQMAKAG
>Mature_332_residues
MKLRTFIALFAVIIFFALFAPNFTSTANMILMSKHVALNAFLAMGMTFVIITGGIDLSVGSIVGLCGMVAGGLILYGIEL
PIGYTIYFNLFEIVLITLSIGLVIGLVNGLLITKLNVAPFIATLGTLYIARGLALLSSDGQTFPNLVGRPEYATTGFDFF
GAGRILGLPVSIWILIVLALAAAYVARSTPIGRHIFAVGGNERAARMSGIRVDVVKIFVYMFSGLCAAIVGVVISSELMA
AHPATGESFELNAIAAAVLGGTSMSGGRGTIGGTIIGAFVIGILSDGLVMMGVSSFWQMVIKGLVIIIAVVVDQAQRRLQ
QRVTLMQMAKAG

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=317, Percent_Identity=42.2712933753943, Blast_Score=226, Evalue=2e-60,
Organism=Escherichia coli, GI1788896, Length=298, Percent_Identity=35.5704697986577, Blast_Score=161, Evalue=6e-41,
Organism=Escherichia coli, GI1790524, Length=316, Percent_Identity=34.8101265822785, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI145693152, Length=316, Percent_Identity=33.8607594936709, Blast_Score=157, Evalue=7e-40,
Organism=Escherichia coli, GI1789992, Length=372, Percent_Identity=31.4516129032258, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1787793, Length=298, Percent_Identity=33.2214765100671, Blast_Score=121, Evalue=8e-29,
Organism=Escherichia coli, GI145693214, Length=254, Percent_Identity=35.0393700787402, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI87082395, Length=323, Percent_Identity=31.2693498452012, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1788471, Length=326, Percent_Identity=35.8895705521472, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1787794, Length=300, Percent_Identity=33.3333333333333, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34847; Mature: 34847

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRTFIALFAVIIFFALFAPNFTSTANMILMSKHVALNAFLAMGMTFVIITGGIDLSVG
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHH
SIVGLCGMVAGGLILYGIELPIGYTIYFNLFEIVLITLSIGLVIGLVNGLLITKLNVAPF
HHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
IATLGTLYIARGLALLSSDGQTFPNLVGRPEYATTGFDFFGAGRILGLPVSIWILIVLAL
HHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHH
AAAYVARSTPIGRHIFAVGGNERAARMSGIRVDVVKIFVYMFSGLCAAIVGVVISSELMA
HHHHHHHCCCCCCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHPATGESFELNAIAAAVLGGTSMSGGRGTIGGTIIGAFVIGILSDGLVMMGVSSFWQMV
CCCCCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IKGLVIIIAVVVDQAQRRLQQRVTLMQMAKAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLRTFIALFAVIIFFALFAPNFTSTANMILMSKHVALNAFLAMGMTFVIITGGIDLSVG
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHH
SIVGLCGMVAGGLILYGIELPIGYTIYFNLFEIVLITLSIGLVIGLVNGLLITKLNVAPF
HHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
IATLGTLYIARGLALLSSDGQTFPNLVGRPEYATTGFDFFGAGRILGLPVSIWILIVLAL
HHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHH
AAAYVARSTPIGRHIFAVGGNERAARMSGIRVDVVKIFVYMFSGLCAAIVGVVISSELMA
HHHHHHHCCCCCCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHPATGESFELNAIAAAVLGGTSMSGGRGTIGGTIIGAFVIGILSDGLVMMGVSSFWQMV
CCCCCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IKGLVIIIAVVVDQAQRRLQQRVTLMQMAKAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]