The gene/protein map for NC_008542 is currently unavailable.
Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

Click here to switch to the map view.

The map label for this gene is 86360766

Identifier: 86360766

GI number: 86360766

Start: 32287

End: 34131

Strand: Reverse

Name: 86360766

Synonym: RHE_PF00032

Alternate gene names: NA

Gene position: 34131-32287 (Counterclockwise)

Preceding gene: 86360767

Following gene: 86360765

Centisome position: 5.31

GC content: 64.66

Gene sequence:

>1845_bases
ATGACCGCCGATGCGTTCCAGCTCTACGGTACTCGCGTTGAGGAAAGGCCGACGGTTCGCCTGACGGCGGGAAAGCTAAC
GGCCGATCTCGCCGATGGCAATCTCCGCACGATCCGCTACGACGGCGTCGAGGTGCTGCGGGCGATTTCCTATCTCGTCC
GCGACCGGGACTGGGGCACTTATAGTCCTGAGATCGCGGGCCTCAGGATTGAGCAGGGTAAGGATCGTTTTGAGGTTAGC
TATCGGGCTCGCTGCGAGGGACCTGATGAGACGGCGCTCGTGATCGGGGTCCGCATCAGCGGCGATCAGGACCGGCTCGA
TTTCGAGGCCGAAGCTACCTCACGGACCGGCTTCGATACCAACCGCTGCGGCTTCTGCATCCTGCATCCGATCGTCGGTG
TTGCCGGTTCGCCGGCAGCGGTCGAACATGTCGACGGACAGATCGAGGCGACGCGTTTTCCGGATCTCATCGAGCCCTGG
CAGCCGATCAAGGACATGCGCGCCATCACCCATCAGGTCATGCCTGATGTGAGCGCGGAATGCCGGATGGAGGGCGACAC
CTTCGAAATGGAGGACCAGCGCAACTGGTCCGATGCCTCCTACAAGACCTATGTCAGGCCGCTCGCTTTGCCCTGGCCTT
ACCAGATCCCGGCGAACCAGCCTGTCCGGCAGAAGACGTCGCTCATCATCAGCGATACCAGCCGCTCCGTCACGCCGCCG
GTCGCCGCGCAGAGCGGAGTCACACGACTCGAATTCGGCGCGCGAACCGGCACAATGCCCGGTATCGGTGTGATCGTGAC
GCCCGAGGAGGCCGATGCGACGCTGACGGCTAGGTCCCTCCTGACGGAGATCGCGCTTCGCGAGCTTCTCTTTCATTTCG
ATCCCGACGCCGGGCATGGCGCCGACGCATTGGAAAACTTCGCCGCGATCGCCGCTCTCCATCCCGGCCGCTCGACGCTG
GAGATCGCGCTTCCCTGCAAATCGTCGCCGGCGGGCGAGGCGGCCGAGATCGCGCGGCAGATGCAGATTGCGGGCTTCAA
GCCGGATGCGATCTTGATCTCGCCTTCCGTCGACCGGCAATCGACGCCGCCCGGCAGCAAATGGCCGGACTGCCCTCCCC
TCGAAGAGGTCTATGCCGCGGCCCGCGCCGCCTTTCCCGGCATTCGCATCGGCGGCGGTATGCTGAGCTATTTCACCGAG
CTCAACCGCAAGCGCGTGCCGGCAGGCGAGATCGATTTCGTCAGCCATTGCACCAACCCAATCGTGCATGCCGCCGACGA
TCTCAGCGTCATGCAGACATTGGAGGCGCTGCCCTTCATCACGCGCTCCGTCCGGGCGATCTACGACGACAAGCCCTATC
GCATCGGTCCCTCGACGATCCCGATGCGGCAAAATCCCTATGGCAGCCGCACGATGGACAATCCGTTCGGCGGACGCATT
CCGATGGCGAACCGCGATCCCCGCCACAACGGCCGTTTCGCCGAGGCCTTCGCGCTCGGCTATGCGATCCGGGTGCTGGA
TGCCGGTCTCGAATGCCTGACACTTTCGGCGCTGACCGGTCCTTTCGGCCTGATCGCCGGTCCCGATGAACCGGTCGAAC
GAGGCGGGCGGCGGCCGCTCTTCAACACGGTGCAGACCTTGTCGGCGCTCGCGGGTGCATCCTGGCAGGAATGCCTCTCG
TCCTCGCCCTCCGAAGTGCTGTCTTTCGTCGCAAGGGACGCCGCTGGCGCCAAGCTCTACGTGGTCAATCTCACAGGCGA
AGAGCGAAGGGTGGATGGGGGCGCACTCGCCGAAGAGCTGCGGCTCGCGCCCTTCGCGACGGCCGCCTTGCCGCTGGCGG
ATTGA

Upstream 100 bases:

>100_bases
CGACCTCGGGCGCCGACAATCTGAAGACCTTCGCACTCGTCGAGGCGGCCTACGACAGCGCGGCACAAGGCCGAACGATC
GATGTTCGGGCGATGCTGCG

Downstream 100 bases:

>100_bases
CCTCTGGCCCGCCCGTCGCAGTGGGAGCTCGTTCTGGGGAGGATAGGCGTGAAGACGAAGAAGCTAATCAATGCAGGCGC
GGATGCCGTCGATGAGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 614; Mature: 613

Protein sequence:

>614_residues
MTADAFQLYGTRVEERPTVRLTAGKLTADLADGNLRTIRYDGVEVLRAISYLVRDRDWGTYSPEIAGLRIEQGKDRFEVS
YRARCEGPDETALVIGVRISGDQDRLDFEAEATSRTGFDTNRCGFCILHPIVGVAGSPAAVEHVDGQIEATRFPDLIEPW
QPIKDMRAITHQVMPDVSAECRMEGDTFEMEDQRNWSDASYKTYVRPLALPWPYQIPANQPVRQKTSLIISDTSRSVTPP
VAAQSGVTRLEFGARTGTMPGIGVIVTPEEADATLTARSLLTEIALRELLFHFDPDAGHGADALENFAAIAALHPGRSTL
EIALPCKSSPAGEAAEIARQMQIAGFKPDAILISPSVDRQSTPPGSKWPDCPPLEEVYAAARAAFPGIRIGGGMLSYFTE
LNRKRVPAGEIDFVSHCTNPIVHAADDLSVMQTLEALPFITRSVRAIYDDKPYRIGPSTIPMRQNPYGSRTMDNPFGGRI
PMANRDPRHNGRFAEAFALGYAIRVLDAGLECLTLSALTGPFGLIAGPDEPVERGGRRPLFNTVQTLSALAGASWQECLS
SSPSEVLSFVARDAAGAKLYVVNLTGEERRVDGGALAEELRLAPFATAALPLAD

Sequences:

>Translated_614_residues
MTADAFQLYGTRVEERPTVRLTAGKLTADLADGNLRTIRYDGVEVLRAISYLVRDRDWGTYSPEIAGLRIEQGKDRFEVS
YRARCEGPDETALVIGVRISGDQDRLDFEAEATSRTGFDTNRCGFCILHPIVGVAGSPAAVEHVDGQIEATRFPDLIEPW
QPIKDMRAITHQVMPDVSAECRMEGDTFEMEDQRNWSDASYKTYVRPLALPWPYQIPANQPVRQKTSLIISDTSRSVTPP
VAAQSGVTRLEFGARTGTMPGIGVIVTPEEADATLTARSLLTEIALRELLFHFDPDAGHGADALENFAAIAALHPGRSTL
EIALPCKSSPAGEAAEIARQMQIAGFKPDAILISPSVDRQSTPPGSKWPDCPPLEEVYAAARAAFPGIRIGGGMLSYFTE
LNRKRVPAGEIDFVSHCTNPIVHAADDLSVMQTLEALPFITRSVRAIYDDKPYRIGPSTIPMRQNPYGSRTMDNPFGGRI
PMANRDPRHNGRFAEAFALGYAIRVLDAGLECLTLSALTGPFGLIAGPDEPVERGGRRPLFNTVQTLSALAGASWQECLS
SSPSEVLSFVARDAAGAKLYVVNLTGEERRVDGGALAEELRLAPFATAALPLAD
>Mature_613_residues
TADAFQLYGTRVEERPTVRLTAGKLTADLADGNLRTIRYDGVEVLRAISYLVRDRDWGTYSPEIAGLRIEQGKDRFEVSY
RARCEGPDETALVIGVRISGDQDRLDFEAEATSRTGFDTNRCGFCILHPIVGVAGSPAAVEHVDGQIEATRFPDLIEPWQ
PIKDMRAITHQVMPDVSAECRMEGDTFEMEDQRNWSDASYKTYVRPLALPWPYQIPANQPVRQKTSLIISDTSRSVTPPV
AAQSGVTRLEFGARTGTMPGIGVIVTPEEADATLTARSLLTEIALRELLFHFDPDAGHGADALENFAAIAALHPGRSTLE
IALPCKSSPAGEAAEIARQMQIAGFKPDAILISPSVDRQSTPPGSKWPDCPPLEEVYAAARAAFPGIRIGGGMLSYFTEL
NRKRVPAGEIDFVSHCTNPIVHAADDLSVMQTLEALPFITRSVRAIYDDKPYRIGPSTIPMRQNPYGSRTMDNPFGGRIP
MANRDPRHNGRFAEAFALGYAIRVLDAGLECLTLSALTGPFGLIAGPDEPVERGGRRPLFNTVQTLSALAGASWQECLSS
SPSEVLSFVARDAAGAKLYVVNLTGEERRVDGGALAEELRLAPFATAALPLAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66693; Mature: 66562

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00527 RIBOSOMAL_S14

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADAFQLYGTRVEERPTVRLTAGKLTADLADGNLRTIRYDGVEVLRAISYLVRDRDWGT
CCCCHHHHHCCCCCCCCCEEEECCCEEEEECCCCEEEEEECHHHHHHHHHHHHHCCCCCC
YSPEIAGLRIEQGKDRFEVSYRARCEGPDETALVIGVRISGDQDRLDFEAEATSRTGFDT
CCCCEEEEEEECCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCC
NRCGFCILHPIVGVAGSPAAVEHVDGQIEATRFPDLIEPWQPIKDMRAITHQVMPDVSAE
CCCCCEEEHHHHCCCCCCHHHHHCCCCEEECCCCCHHCCHHHHHHHHHHHHHHCCCCCHH
CRMEGDTFEMEDQRNWSDASYKTYVRPLALPWPYQIPANQPVRQKTSLIISDTSRSVTPP
EEECCCCEECCCCCCCCCCCHHHHHCEECCCCCCCCCCCCCCHHHCEEEEECCCCCCCCC
VAAQSGVTRLEFGARTGTMPGIGVIVTPEEADATLTARSLLTEIALRELLFHFDPDAGHG
CHHHCCCEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
ADALENFAAIAALHPGRSTLEIALPCKSSPAGEAAEIARQMQIAGFKPDAILISPSVDRQ
HHHHHHHHHHEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCC
STPPGSKWPDCPPLEEVYAAARAAFPGIRIGGGMLSYFTELNRKRVPAGEIDFVSHCTNP
CCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCCHHHHHCCCC
IVHAADDLSVMQTLEALPFITRSVRAIYDDKPYRIGPSTIPMRQNPYGSRTMDNPFGGRI
CEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC
PMANRDPRHNGRFAEAFALGYAIRVLDAGLECLTLSALTGPFGLIAGPDEPVERGGRRPL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEHHHHCCCCEEECCCCCHHHCCCCCCH
FNTVQTLSALAGASWQECLSSSPSEVLSFVARDAAGAKLYVVNLTGEERRVDGGALAEEL
HHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHH
RLAPFATAALPLAD
HCCCHHHCCCCCCC
>Mature Secondary Structure 
TADAFQLYGTRVEERPTVRLTAGKLTADLADGNLRTIRYDGVEVLRAISYLVRDRDWGT
CCCHHHHHCCCCCCCCCEEEECCCEEEEECCCCEEEEEECHHHHHHHHHHHHHCCCCCC
YSPEIAGLRIEQGKDRFEVSYRARCEGPDETALVIGVRISGDQDRLDFEAEATSRTGFDT
CCCCEEEEEEECCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCC
NRCGFCILHPIVGVAGSPAAVEHVDGQIEATRFPDLIEPWQPIKDMRAITHQVMPDVSAE
CCCCCEEEHHHHCCCCCCHHHHHCCCCEEECCCCCHHCCHHHHHHHHHHHHHHCCCCCHH
CRMEGDTFEMEDQRNWSDASYKTYVRPLALPWPYQIPANQPVRQKTSLIISDTSRSVTPP
EEECCCCEECCCCCCCCCCCHHHHHCEECCCCCCCCCCCCCCHHHCEEEEECCCCCCCCC
VAAQSGVTRLEFGARTGTMPGIGVIVTPEEADATLTARSLLTEIALRELLFHFDPDAGHG
CHHHCCCEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
ADALENFAAIAALHPGRSTLEIALPCKSSPAGEAAEIARQMQIAGFKPDAILISPSVDRQ
HHHHHHHHHHEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCC
STPPGSKWPDCPPLEEVYAAARAAFPGIRIGGGMLSYFTELNRKRVPAGEIDFVSHCTNP
CCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCCHHHHHCCCC
IVHAADDLSVMQTLEALPFITRSVRAIYDDKPYRIGPSTIPMRQNPYGSRTMDNPFGGRI
CEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC
PMANRDPRHNGRFAEAFALGYAIRVLDAGLECLTLSALTGPFGLIAGPDEPVERGGRRPL
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEHHHHCCCCEEECCCCCHHHCCCCCCH
FNTVQTLSALAGASWQECLSSSPSEVLSFVARDAAGAKLYVVNLTGEERRVDGGALAEEL
HHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHH
RLAPFATAALPLAD
HCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA