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The map label for this gene is yfkH [H]

Identifier: 86360754

GI number: 86360754

Start: 19535

End: 20614

Strand: Reverse

Name: yfkH [H]

Synonym: RHE_PF00020

Alternate gene names: 86360754

Gene position: 20614-19535 (Counterclockwise)

Preceding gene: 86360755

Following gene: 86360753

Centisome position: 3.21

GC content: 63.43

Gene sequence:

>1080_bases
ATGGCTGATGTGCTGCGCCTCAAGGGATATCCGCTCACTGCGGCAATGATGGCGGCTGCTGTGGGTGTGTTTGTGTTGCT
GCAGGCAAGGCAACGCGGTTCGCTGGCGCCTTCTGCCGCGGTCGCCCCGTCGGGCGACGATCATGGGCGCAGCGCCGCGA
CGCCCGAGGCCATTCCGATGAGCGGCCTTCGCGATGTGTTCTGGCGCGTCTTCCATGAGGTCCTCGACGACCGGGTCACC
CTTATTGCCGCGGGCGTAACTTTCTATCTGCTCCTGGCGCTGTTCCCGGCCCTGGCGGCCCTGGTCTCGCTGTACGGCCT
GGTCGCCGATCCGATCACCATTTCCGAACATCTTCGCGAGCTCGCCATCCTCCTGCCGCCCGGGGCTTTCGATCTTCTTG
CCGATCAACTCAAGGCGCTGGTCGAAAAACGCGACAGCACGCTCGGCATCACCTTCTTCGTCGGTCTCGGCATTGCGCTG
TGGAGCACCCATAGCGGCACCCTGGCGATCTTCGATGCGATGAACGTCGCCTATGAGGAGAGGGAGAAGCGCAGCCTGGT
GCGGCTGAACCTGATCGGCCTCTGCTTCACCCTCTGTGCCGTGGTCTTCGCGGTCGTCGTGGTGGCGCTCATGGGCGTAA
TGCCTGTCGTGCTCTCCTATCTCTGGCTTGATCAGTTCAAGGAGCACATGGCGCTTCTGCTAAGATGGCCGCTGCTTCTG
CTGGTCGTCGTCGTGGCCGTGACCTTCGTCTACCGCTTCGGTCCGAGCCGCGAACCCGCGCGAGTGCGGTGGATGACCTG
GGGTGCGGTCCTAACGGCGCTCGCCTGCGCCGCCATGTCGCTCGGCTTCTCCTTCTATCTCGAGCATTTCGCCAATTACG
ACGCGACTTACGGTACGCTCGGCGCGCTTATTGGTTTCCTCATCTGGATCTGGCTTTCCGTCGTCATTCTCATCGTCGGC
GCGGAGCTCAATGCTGAGCTGGAGCATCAGACGGCGCGGGACACGACGACGGGCCACCCGTTGCCGATGGGCGCGCGCGG
CGCCTATGTCGCCGATACCCTGGGCGAGATCGTGAACTGA

Upstream 100 bases:

>100_bases
GCCCCTCCCCTCACCGGAAATCTCGGCAAGAAAGCAACGGTTTGCATCCTTTAGCGGCACCCGGCGTTATTCCCGAAGCA
AATCGTCGGAGGATAGAGTA

Downstream 100 bases:

>100_bases
ACGTCTGAGCATGATGCCGAAAGCATGCTCCACTCTTAATTGAGCAGTCGCGATGACTGCTCCTCGAATTGATGTATCCT
GTCCTTCGGCAGGTTCGACA

Product: putative ribonuclease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MADVLRLKGYPLTAAMMAAAVGVFVLLQARQRGSLAPSAAVAPSGDDHGRSAATPEAIPMSGLRDVFWRVFHEVLDDRVT
LIAAGVTFYLLLALFPALAALVSLYGLVADPITISEHLRELAILLPPGAFDLLADQLKALVEKRDSTLGITFFVGLGIAL
WSTHSGTLAIFDAMNVAYEEREKRSLVRLNLIGLCFTLCAVVFAVVVVALMGVMPVVLSYLWLDQFKEHMALLLRWPLLL
LVVVVAVTFVYRFGPSREPARVRWMTWGAVLTALACAAMSLGFSFYLEHFANYDATYGTLGALIGFLIWIWLSVVILIVG
AELNAELEHQTARDTTTGHPLPMGARGAYVADTLGEIVN

Sequences:

>Translated_359_residues
MADVLRLKGYPLTAAMMAAAVGVFVLLQARQRGSLAPSAAVAPSGDDHGRSAATPEAIPMSGLRDVFWRVFHEVLDDRVT
LIAAGVTFYLLLALFPALAALVSLYGLVADPITISEHLRELAILLPPGAFDLLADQLKALVEKRDSTLGITFFVGLGIAL
WSTHSGTLAIFDAMNVAYEEREKRSLVRLNLIGLCFTLCAVVFAVVVVALMGVMPVVLSYLWLDQFKEHMALLLRWPLLL
LVVVVAVTFVYRFGPSREPARVRWMTWGAVLTALACAAMSLGFSFYLEHFANYDATYGTLGALIGFLIWIWLSVVILIVG
AELNAELEHQTARDTTTGHPLPMGARGAYVADTLGEIVN
>Mature_358_residues
ADVLRLKGYPLTAAMMAAAVGVFVLLQARQRGSLAPSAAVAPSGDDHGRSAATPEAIPMSGLRDVFWRVFHEVLDDRVTL
IAAGVTFYLLLALFPALAALVSLYGLVADPITISEHLRELAILLPPGAFDLLADQLKALVEKRDSTLGITFFVGLGIALW
STHSGTLAIFDAMNVAYEEREKRSLVRLNLIGLCFTLCAVVFAVVVVALMGVMPVVLSYLWLDQFKEHMALLLRWPLLLL
VVVVAVTFVYRFGPSREPARVRWMTWGAVLTALACAAMSLGFSFYLEHFANYDATYGTLGALIGFLIWIWLSVVILIVGA
ELNAELEHQTARDTTTGHPLPMGARGAYVADTLGEIVN

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 38987; Mature: 38856

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADVLRLKGYPLTAAMMAAAVGVFVLLQARQRGSLAPSAAVAPSGDDHGRSAATPEAIPM
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
SGLRDVFWRVFHEVLDDRVTLIAAGVTFYLLLALFPALAALVSLYGLVADPITISEHLRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LAILLPPGAFDLLADQLKALVEKRDSTLGITFFVGLGIALWSTHSGTLAIFDAMNVAYEE
HHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH
REKRSLVRLNLIGLCFTLCAVVFAVVVVALMGVMPVVLSYLWLDQFKEHMALLLRWPLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVVVAVTFVYRFGPSREPARVRWMTWGAVLTALACAAMSLGFSFYLEHFANYDATYGTL
HHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
GALIGFLIWIWLSVVILIVGAELNAELEHQTARDTTTGHPLPMGARGAYVADTLGEIVN
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
ADVLRLKGYPLTAAMMAAAVGVFVLLQARQRGSLAPSAAVAPSGDDHGRSAATPEAIPM
CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
SGLRDVFWRVFHEVLDDRVTLIAAGVTFYLLLALFPALAALVSLYGLVADPITISEHLRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LAILLPPGAFDLLADQLKALVEKRDSTLGITFFVGLGIALWSTHSGTLAIFDAMNVAYEE
HHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH
REKRSLVRLNLIGLCFTLCAVVFAVVVVALMGVMPVVLSYLWLDQFKEHMALLLRWPLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVVVVAVTFVYRFGPSREPARVRWMTWGAVLTALACAAMSLGFSFYLEHFANYDATYGTL
HHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
GALIGFLIWIWLSVVILIVGAELNAELEHQTARDTTTGHPLPMGARGAYVADTLGEIVN
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]