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The map label for this gene is hypC [H]

Identifier: 85860205

GI number: 85860205

Start: 2403362

End: 2403592

Strand: Direct

Name: hypC [H]

Synonym: SYN_00597

Alternate gene names: 85860205

Gene position: 2403362-2403592 (Clockwise)

Preceding gene: 85860203

Following gene: 85860206

Centisome position: 75.59

GC content: 50.22

Gene sequence:

>231_bases
ATGTGCATCGCCTTTCCCGGTAAAATTCTGACCATCGATCAGGATAATTTCGCCGTGATCAACATCAACGGAACGCGGCG
CGAGGTCTGCCTTGACATCATCGATGAAAAGGTCACCGTGGGCGACTATGTCATCTGTCACGCCGGGTACGCCATCCACC
GGATCGATGAAAAGCTGGCGCTGGAGAACCTTGCTTTGCTGAAAGAGATTATCGATCGTGAAATTTATTGA

Upstream 100 bases:

>100_bases
GATTTCGAAGTTCTTTTAATATATCAACTGATCCGTTTCCATTTATTGAGAGTTATTTGTTTTTTGCAGGTTAATATAAA
GATGTCTTGGAGATTTATTT

Downstream 100 bases:

>100_bases
CGAATACCGGGATCCCGATCTCGTTCGGCACCTTCTCGATGCCGTGGCGGCGCTGGCAGCCCGGGTCGGCCGTCGGATCA
GCCTGATGGAGATCTGCGGC

Product: Ni-Fe hydrogenase -specific chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MCIAFPGKILTIDQDNFAVININGTRREVCLDIIDEKVTVGDYVICHAGYAIHRIDEKLALENLALLKEIIDREIY

Sequences:

>Translated_76_residues
MCIAFPGKILTIDQDNFAVININGTRREVCLDIIDEKVTVGDYVICHAGYAIHRIDEKLALENLALLKEIIDREIY
>Mature_76_residues
MCIAFPGKILTIDQDNFAVININGTRREVCLDIIDEKVTVGDYVICHAGYAIHRIDEKLALENLALLKEIIDREIY

Specific function: Required for production of hydrogenase [H]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 8633; Mature: 8633

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIAFPGKILTIDQDNFAVININGTRREVCLDIIDEKVTVGDYVICHAGYAIHRIDEKLA
CEEECCCEEEEECCCCEEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCCEEHHHHHHH
LENLALLKEIIDREIY
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCIAFPGKILTIDQDNFAVININGTRREVCLDIIDEKVTVGDYVICHAGYAIHRIDEKLA
CEEECCCEEEEECCCCEEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCCEEHHHHHHH
LENLALLKEIIDREIY
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954 [H]