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The map label for this gene is nusG [H]

Identifier: 85860190

GI number: 85860190

Start: 2392469

End: 2392972

Strand: Direct

Name: nusG [H]

Synonym: SYN_00580

Alternate gene names: 85860190

Gene position: 2392469-2392972 (Clockwise)

Preceding gene: 85860188

Following gene: 85860191

Centisome position: 75.25

GC content: 52.38

Gene sequence:

>504_bases
ATGTCCTGGTATGCGGTTCACACAAGAAGCCGTCACGAAGACAAAGTCTTTACCGGTCTCGTTCAGAAATCCATCACCAC
GTTTCTACCGAAGATCGAGGTCTGGAGCAAAAGAAAAGATCGCCGGAAAAGGATTATGACCCCCCTTTTCCCGGGATATC
TATTCGTTGACATGCCCTGTCTCGATAATCAGGCGAAGCTGGATGTGCTGAAGACCTTCGGCGTTGTCCGCATTCTCGGC
AAGCCCACCGGATCGGCTCCGATCCCCGTCCCAGATGACAAGATCGATGCGATTCGCCGCATCGTGGATTCCAGGGTTGA
GGTTCAGAATCTTCAGTATCCGCATGTGGGAGAAGCGGCCAGGATTGTCGACGGCCCATTCAAGGGCATAGAAGGCACGG
TGATCAAAACGGATTACGACAAGGATCTTTTTGTCGTCACGATCGAACTGCTCCAGCGGTCCGTGGCCATCAAACTCGAC
AGTTCCCAGATCGAGAAGATATGA

Upstream 100 bases:

>100_bases
TAAACAAGGAAGAGCGGGTTTGTTCCGGGCAGCCCGCTCTCTCCATGTCGATCATTGGGTTTGTCTTTTTTGGAATATGA
TGTAATTAGAGGATGCGGTT

Downstream 100 bases:

>100_bases
ACCCCGGGACGCGATATCCTTACAGATGAGTATTTCACCGGAAAAAGAAAAAGACGTCGCCCAGCGGATGGCCCGCCTTG
GAATTTCAGAGGACGATTTA

Product: transcription antitermination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSWYAVHTRSRHEDKVFTGLVQKSITTFLPKIEVWSKRKDRRKRIMTPLFPGYLFVDMPCLDNQAKLDVLKTFGVVRILG
KPTGSAPIPVPDDKIDAIRRIVDSRVEVQNLQYPHVGEAARIVDGPFKGIEGTVIKTDYDKDLFVVTIELLQRSVAIKLD
SSQIEKI

Sequences:

>Translated_167_residues
MSWYAVHTRSRHEDKVFTGLVQKSITTFLPKIEVWSKRKDRRKRIMTPLFPGYLFVDMPCLDNQAKLDVLKTFGVVRILG
KPTGSAPIPVPDDKIDAIRRIVDSRVEVQNLQYPHVGEAARIVDGPFKGIEGTVIKTDYDKDLFVVTIELLQRSVAIKLD
SSQIEKI
>Mature_166_residues
SWYAVHTRSRHEDKVFTGLVQKSITTFLPKIEVWSKRKDRRKRIMTPLFPGYLFVDMPCLDNQAKLDVLKTFGVVRILGK
PTGSAPIPVPDDKIDAIRRIVDSRVEVQNLQYPHVGEAARIVDGPFKGIEGTVIKTDYDKDLFVVTIELLQRSVAIKLDS
SQIEKI

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=178, Percent_Identity=30.3370786516854, Blast_Score=71, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 19020; Mature: 18889

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWYAVHTRSRHEDKVFTGLVQKSITTFLPKIEVWSKRKDRRKRIMTPLFPGYLFVDMPC
CCEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
LDNQAKLDVLKTFGVVRILGKPTGSAPIPVPDDKIDAIRRIVDSRVEVQNLQYPHVGEAA
CCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH
RIVDGPFKGIEGTVIKTDYDKDLFVVTIELLQRSVAIKLDSSQIEKI
HHCCCCCCCCCCCEEEECCCCCHHEEEHHHHHHHHEEEECHHHHCCC
>Mature Secondary Structure 
SWYAVHTRSRHEDKVFTGLVQKSITTFLPKIEVWSKRKDRRKRIMTPLFPGYLFVDMPC
CEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
LDNQAKLDVLKTFGVVRILGKPTGSAPIPVPDDKIDAIRRIVDSRVEVQNLQYPHVGEAA
CCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH
RIVDGPFKGIEGTVIKTDYDKDLFVVTIELLQRSVAIKLDSSQIEKI
HHCCCCCCCCCCCEEEECCCCCHHEEEHHHHHHHHEEEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]