Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859990

Identifier: 85859990

GI number: 85859990

Start: 2211642

End: 2212124

Strand: Direct

Name: 85859990

Synonym: SYN_00726

Alternate gene names: NA

Gene position: 2211642-2212124 (Clockwise)

Preceding gene: 85859989

Following gene: 85859993

Centisome position: 69.56

GC content: 45.55

Gene sequence:

>483_bases
ATGAAAAAGATACTTGTGGCAATCGATGAATCGAAGAATGCTTTTAAATCCGTAGATTTTATCAGCCGCTTTTTTTCAGG
AAGTGAGGGTGTGCAGATTACTCTTTTTCACGTCCTTCCGGAATTTCCGCCTTCTTTCTGGGATGATGGCCATTTTCTTA
ATGCAGCGGAAAAGTCGGCGAGACGGGAAGTTATCGAAAAATGGCAGAACAACCAGCAGCTTAAGCTTGAATCAGTATTT
AAGAAAGTAACCGAGAGGCTGGAGAACGCAGGGTTGAACAAGAATCAGATCACAACCAAATCAGTCGTTGCAACCCTTGA
CGTTGTTGCTGACCGCATTCTGGAAGAAGCCAGAACAGGCGGCTATCAGATGCTTGTGATGGGTAGACACGGATACTCGA
GCACCAGGAAGCTTACCATGGGAAGTGTTTCTAATGCGGTCCTCAGCCAGGATTCAGCGCTGGCTGTTTGCATAGTCAAA
TAA

Upstream 100 bases:

>100_bases
CGTTTCCCCCAAAAACCTGATTTCAAACGGGGCAGGAATAATGATATAAGTGCTCAGGAATCATTAATATTGCCATTTAA
TTATCAATAAGGAGGGCGAA

Downstream 100 bases:

>100_bases
TAATATTACATAGAAGGGAGGGCAGCCATATTCATCTTCAACCGAAAGGTAATCGGCGGTTGGTAACTCTTCCTCGGTTC
ATCCGGATAATGACTGCTTT

Product: UspA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKKILVAIDESKNAFKSVDFISRFFSGSEGVQITLFHVLPEFPPSFWDDGHFLNAAEKSARREVIEKWQNNQQLKLESVF
KKVTERLENAGLNKNQITTKSVVATLDVVADRILEEARTGGYQMLVMGRHGYSSTRKLTMGSVSNAVLSQDSALAVCIVK

Sequences:

>Translated_160_residues
MKKILVAIDESKNAFKSVDFISRFFSGSEGVQITLFHVLPEFPPSFWDDGHFLNAAEKSARREVIEKWQNNQQLKLESVF
KKVTERLENAGLNKNQITTKSVVATLDVVADRILEEARTGGYQMLVMGRHGYSSTRKLTMGSVSNAVLSQDSALAVCIVK
>Mature_160_residues
MKKILVAIDESKNAFKSVDFISRFFSGSEGVQITLFHVLPEFPPSFWDDGHFLNAAEKSARREVIEKWQNNQQLKLESVF
KKVTERLENAGLNKNQITTKSVVATLDVVADRILEEARTGGYQMLVMGRHGYSSTRKLTMGSVSNAVLSQDSALAVCIVK

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17881; Mature: 17881

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILVAIDESKNAFKSVDFISRFFSGSEGVQITLFHVLPEFPPSFWDDGHFLNAAEKSA
CCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEECHHHHHH
RREVIEKWQNNQQLKLESVFKKVTERLENAGLNKNQITTKSVVATLDVVADRILEEARTG
HHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
GYQMLVMGRHGYSSTRKLTMGSVSNAVLSQDSALAVCIVK
CEEEEEEECCCCCCCCEEECCCHHHHHHCCCCCEEEEEEC
>Mature Secondary Structure
MKKILVAIDESKNAFKSVDFISRFFSGSEGVQITLFHVLPEFPPSFWDDGHFLNAAEKSA
CCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEECHHHHHH
RREVIEKWQNNQQLKLESVFKKVTERLENAGLNKNQITTKSVVATLDVVADRILEEARTG
HHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
GYQMLVMGRHGYSSTRKLTMGSVSNAVLSQDSALAVCIVK
CEEEEEEECCCCCCCCEEECCCHHHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA