Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
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Accession | NC_007759 |
Length | 3,179,300 |
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The map label for this gene is 85859990
Identifier: 85859990
GI number: 85859990
Start: 2211642
End: 2212124
Strand: Direct
Name: 85859990
Synonym: SYN_00726
Alternate gene names: NA
Gene position: 2211642-2212124 (Clockwise)
Preceding gene: 85859989
Following gene: 85859993
Centisome position: 69.56
GC content: 45.55
Gene sequence:
>483_bases ATGAAAAAGATACTTGTGGCAATCGATGAATCGAAGAATGCTTTTAAATCCGTAGATTTTATCAGCCGCTTTTTTTCAGG AAGTGAGGGTGTGCAGATTACTCTTTTTCACGTCCTTCCGGAATTTCCGCCTTCTTTCTGGGATGATGGCCATTTTCTTA ATGCAGCGGAAAAGTCGGCGAGACGGGAAGTTATCGAAAAATGGCAGAACAACCAGCAGCTTAAGCTTGAATCAGTATTT AAGAAAGTAACCGAGAGGCTGGAGAACGCAGGGTTGAACAAGAATCAGATCACAACCAAATCAGTCGTTGCAACCCTTGA CGTTGTTGCTGACCGCATTCTGGAAGAAGCCAGAACAGGCGGCTATCAGATGCTTGTGATGGGTAGACACGGATACTCGA GCACCAGGAAGCTTACCATGGGAAGTGTTTCTAATGCGGTCCTCAGCCAGGATTCAGCGCTGGCTGTTTGCATAGTCAAA TAA
Upstream 100 bases:
>100_bases CGTTTCCCCCAAAAACCTGATTTCAAACGGGGCAGGAATAATGATATAAGTGCTCAGGAATCATTAATATTGCCATTTAA TTATCAATAAGGAGGGCGAA
Downstream 100 bases:
>100_bases TAATATTACATAGAAGGGAGGGCAGCCATATTCATCTTCAACCGAAAGGTAATCGGCGGTTGGTAACTCTTCCTCGGTTC ATCCGGATAATGACTGCTTT
Product: UspA domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKKILVAIDESKNAFKSVDFISRFFSGSEGVQITLFHVLPEFPPSFWDDGHFLNAAEKSARREVIEKWQNNQQLKLESVF KKVTERLENAGLNKNQITTKSVVATLDVVADRILEEARTGGYQMLVMGRHGYSSTRKLTMGSVSNAVLSQDSALAVCIVK
Sequences:
>Translated_160_residues MKKILVAIDESKNAFKSVDFISRFFSGSEGVQITLFHVLPEFPPSFWDDGHFLNAAEKSARREVIEKWQNNQQLKLESVF KKVTERLENAGLNKNQITTKSVVATLDVVADRILEEARTGGYQMLVMGRHGYSSTRKLTMGSVSNAVLSQDSALAVCIVK >Mature_160_residues MKKILVAIDESKNAFKSVDFISRFFSGSEGVQITLFHVLPEFPPSFWDDGHFLNAAEKSARREVIEKWQNNQQLKLESVF KKVTERLENAGLNKNQITTKSVVATLDVVADRILEEARTGGYQMLVMGRHGYSSTRKLTMGSVSNAVLSQDSALAVCIVK
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17881; Mature: 17881
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILVAIDESKNAFKSVDFISRFFSGSEGVQITLFHVLPEFPPSFWDDGHFLNAAEKSA CCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEECHHHHHH RREVIEKWQNNQQLKLESVFKKVTERLENAGLNKNQITTKSVVATLDVVADRILEEARTG HHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC GYQMLVMGRHGYSSTRKLTMGSVSNAVLSQDSALAVCIVK CEEEEEEECCCCCCCCEEECCCHHHHHHCCCCCEEEEEEC >Mature Secondary Structure MKKILVAIDESKNAFKSVDFISRFFSGSEGVQITLFHVLPEFPPSFWDDGHFLNAAEKSA CCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEECHHHHHH RREVIEKWQNNQQLKLESVFKKVTERLENAGLNKNQITTKSVVATLDVVADRILEEARTG HHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC GYQMLVMGRHGYSSTRKLTMGSVSNAVLSQDSALAVCIVK CEEEEEEECCCCCCCCEEECCCHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA