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The map label for this gene is fdnI [C]

Identifier: 85859985

GI number: 85859985

Start: 2208039

End: 2208743

Strand: Direct

Name: fdnI [C]

Synonym: SYN_00721

Alternate gene names: 85859985

Gene position: 2208039-2208743 (Clockwise)

Preceding gene: 85859984

Following gene: 85859989

Centisome position: 69.45

GC content: 49.79

Gene sequence:

>705_bases
ATGGCTGAAAAGATTTTGCAAGAAAAGGGTCTCGTTGTCCGTCATGGAAGCGTTGAATTAATCGAGCACTGGGGTATTGC
CCTTTCCGGACTGGTTCTACTGCTATCAGGGCTCTTTGAGCTTCCCATGGCCAATCGATATTACATCACTTCGCTGCCGG
GGTTTTCCTGGTCCGGGGATTATTTCATATCATTGCAGATACATTATATCGCTTCAATTCCCTTCATTGCCCTTGCATTC
TTTCATCTCGTTTACCATGGTATTCGGGGAGATCGGGGACTGATCCCGCAAAAGGGGGACCTGCATGCATCCATAGATGT
CATCAAAAGCTTTTTCGGTAAGGGTGAGGAACCGCCTTTTCAAAAATATCTGCCCGAGCAGCGTCTGGCTTACGTCGGAA
TGGCTGCGATCATTGCCATGCTGATTCTGTCCGGCCTGATCAAAACCTTCAAGAATGTTTATGCTCCAGATATGCCTCTG
GCAATCGTCCTGACTGCCACATGGATACATAACATTCTCTTCATCCTTTTTATCCTTGCCTTTCTGGGGCATATCGGTGC
GATCGCTCTGAAGCCAAACCGCCCGATGGTCCGGGGAATCTTCACAGGCGCCGTTCGACTCGATTACGCCCGGCGCCGTC
ATCCCCTGTGGCTGGCGGAGATCAAGCGGAAAGGAAGGTGTCAATCAAAAGGGGAAGAAGACTAA

Upstream 100 bases:

>100_bases
GCGTTGATTGCGCCGGTACTGGGAATTGCTGCCAGCGCTGCAGCGGGCTTTAACTGGCTGTCCCGGCGGAAGCAGAAGGT
GCAGGAAGAGGAAAAAGACA

Downstream 100 bases:

>100_bases
TTGCTTGTTTTAGCATACAAAGGCTCCTCCTGAGTCCCACTGCGTTTAATTTTTTTGCCGACTTTAACATAGAGGTGCTG
TTGCGGGTCATAAATCAAGG

Product: hypothetical protein

Products: CO2; NADH2 [C]

Alternate protein names: None

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MAEKILQEKGLVVRHGSVELIEHWGIALSGLVLLLSGLFELPMANRYYITSLPGFSWSGDYFISLQIHYIASIPFIALAF
FHLVYHGIRGDRGLIPQKGDLHASIDVIKSFFGKGEEPPFQKYLPEQRLAYVGMAAIIAMLILSGLIKTFKNVYAPDMPL
AIVLTATWIHNILFILFILAFLGHIGAIALKPNRPMVRGIFTGAVRLDYARRRHPLWLAEIKRKGRCQSKGEED

Sequences:

>Translated_234_residues
MAEKILQEKGLVVRHGSVELIEHWGIALSGLVLLLSGLFELPMANRYYITSLPGFSWSGDYFISLQIHYIASIPFIALAF
FHLVYHGIRGDRGLIPQKGDLHASIDVIKSFFGKGEEPPFQKYLPEQRLAYVGMAAIIAMLILSGLIKTFKNVYAPDMPL
AIVLTATWIHNILFILFILAFLGHIGAIALKPNRPMVRGIFTGAVRLDYARRRHPLWLAEIKRKGRCQSKGEED
>Mature_233_residues
AEKILQEKGLVVRHGSVELIEHWGIALSGLVLLLSGLFELPMANRYYITSLPGFSWSGDYFISLQIHYIASIPFIALAFF
HLVYHGIRGDRGLIPQKGDLHASIDVIKSFFGKGEEPPFQKYLPEQRLAYVGMAAIIAMLILSGLIKTFKNVYAPDMPLA
IVLTATWIHNILFILFILAFLGHIGAIALKPNRPMVRGIFTGAVRLDYARRRHPLWLAEIKRKGRCQSKGEED

Specific function: Formate Dehydrogenase Allows E. coli To Use Formate As Major Electron Donor During Anaerobic Respiration, When Nitrate Is Used As Electron Acceptor. Subunit Gamma Is The Cytochrome B556(Fdn) Component Of The Formate Dehydrogenase. [C]

COG id: COG2864

COG function: function code C; Cytochrome b subunit of formate dehydrogenase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26313; Mature: 26181

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKILQEKGLVVRHGSVELIEHWGIALSGLVLLLSGLFELPMANRYYITSLPGFSWSGD
CCHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
YFISLQIHYIASIPFIALAFFHLVYHGIRGDRGLIPQKGDLHASIDVIKSFFGKGEEPPF
EEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCH
QKYLPEQRLAYVGMAAIIAMLILSGLIKTFKNVYAPDMPLAIVLTATWIHNILFILFILA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
FLGHIGAIALKPNRPMVRGIFTGAVRLDYARRRHPLWLAEIKRKGRCQSKGEED
HHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AEKILQEKGLVVRHGSVELIEHWGIALSGLVLLLSGLFELPMANRYYITSLPGFSWSGD
CHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
YFISLQIHYIASIPFIALAFFHLVYHGIRGDRGLIPQKGDLHASIDVIKSFFGKGEEPPF
EEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCH
QKYLPEQRLAYVGMAAIIAMLILSGLIKTFKNVYAPDMPLAIVLTATWIHNILFILFILA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
FLGHIGAIALKPNRPMVRGIFTGAVRLDYARRRHPLWLAEIKRKGRCQSKGEED
HHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; NAD [C]

Specific reaction: formate + NAD = CO2 + NADH2 [C]

General reaction: Oxidoreductases; Acting on the aldehyde or oxo group of donor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA