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The map label for this gene is tnpA [H]

Identifier: 85859231

GI number: 85859231

Start: 1410653

End: 1411576

Strand: Direct

Name: tnpA [H]

Synonym: SYN_01382

Alternate gene names: 85859231

Gene position: 1410653-1411576 (Clockwise)

Preceding gene: 85859225

Following gene: 85859232

Centisome position: 44.37

GC content: 46.97

Gene sequence:

>924_bases
ATGTCCACATCGGTTCTTTATCATGCTTTCAATCTGAAGGGTATTACTTATAGAGCAACACGCTTCACGGGTGACGTCAT
CGAATATTTTGCAGATGTGAAAGAAGAATACATTCGCTGTCCAAAGTGCGGGCAGCGTAAATTTACCTTTAAAGGACAGA
AAACACGGAGTTTTCATCTGGGACCTATGGGGCGTAAGAGGTGTTTGCTTGTACTTTCCCTTCATCGAATAAAATGCAAC
ACTTGCGACACCCTTTGGTGGCCCGATCTGCCTTTTATGGTGGGGAAGCATAGATTTGCCCGATCCTTTGCTCTGATTGT
TCTGGATCTGCTTCGATTCGGCACGATTCGCTGGGTTGCCGATTACCTCGGCGTGGGTTGGGATATGATCAAAGAGATTC
ATAAGTTGAAATTGCAGCGCCTCTATCGGAACATTCCTCTTCATAAAGTTCGGTATATCGGCATTGATGAATTCAGCATC
CGGAAAGGCCATGAGTACATGACCACGGTGATGGATCTCTCCGAAGGACGAATCCTTTACGCCACTGAGGGAAAGGGCAA
GGAGGGGATTTTACCCTTCCTGAAAAAACTTGCACGCAAGGGGAAAAAACTGCGAGCGGTTGCAATGGACATGGGAATTT
CCTTCTTCTCCGCCGTCCGGGAAGCCCTTCCCAATATCGATGTCGTCTTCGACCGTTACCATATTATGGCTCTGATGAAT
CAAGGCATCGAAAACTTGCGCAGAAATCATCAGAAAGAACTTGATGATATCGGGAAGCAAACCCTCAAGGGAAACCGCTT
CCTCCTTTTGCGAAATTATGATTCCCTGAAGCCGGACCATAAGGAACGTCTCGATGCCCTGATGCAGGCCAATCAGCCTC
TATTCGTCATGCATTCCATGAAAGAGCAACTCAGACTCTTCTGA

Upstream 100 bases:

>100_bases
ATCCGGTTAATGAGTACCTTGGTATTGCATAAAATCACATGGACATGGCAAGAGCCCTGTTGTTTGAGACCAATCGAACA
ACAAAAGGAGGCTCCAGACC

Downstream 100 bases:

>100_bases
GAAATACCGGAGTACGCCCAGGCTGTTACCTTCCTTGACACCTGGTGTAAGGACGCCATGCTGTCCGGAATCAAAGAACT
CGTCAAAGTAGCCAAAACGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSTSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHLGPMGRKRCLLVLSLHRIKCN
TCDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVADYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSI
RKGHEYMTTVMDLSEGRILYATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMN
QGIENLRRNHQKELDDIGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSMKEQLRLF

Sequences:

>Translated_307_residues
MSTSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHLGPMGRKRCLLVLSLHRIKCN
TCDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVADYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSI
RKGHEYMTTVMDLSEGRILYATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMN
QGIENLRRNHQKELDDIGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSMKEQLRLF
>Mature_306_residues
STSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHLGPMGRKRCLLVLSLHRIKCNT
CDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVADYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSIR
KGHEYMTTVMDLSEGRILYATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMNQ
GIENLRRNHQKELDDIGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSMKEQLRLF

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 36021; Mature: 35890

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHL
CCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEC
GPMGRKRCLLVLSLHRIKCNTCDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSIRKGHEYMTTVMDLSEGRILY
HHHCCCHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCHHHHCCHHHHHHHHHCCCCEEEE
ATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMN
EECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
QGIENLRRNHQKELDDIGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSM
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEHHHHH
KEQLRLF
HHHHCCC
>Mature Secondary Structure 
STSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHL
CCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEC
GPMGRKRCLLVLSLHRIKCNTCDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSIRKGHEYMTTVMDLSEGRILY
HHHCCCHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCHHHHCCHHHHHHHHHCCCCEEEE
ATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMN
EECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
QGIENLRRNHQKELDDIGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSM
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEHHHHH
KEQLRLF
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]