| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859225
Identifier: 85859225
GI number: 85859225
Start: 1404869
End: 1405213
Strand: Direct
Name: 85859225
Synonym: SYN_01389
Alternate gene names: NA
Gene position: 1404869-1405213 (Clockwise)
Preceding gene: 85859224
Following gene: 85859231
Centisome position: 44.19
GC content: 37.97
Gene sequence:
>345_bases ATGGATTCTGTATATGAAAATACGGATGGCATGCAGGCATCTCTTTATACGAATGGAGATTTAATCGATTCCGTAAACTG GGAAAATCTGGAAGATATCCAATATATGATATCGAACATCACAGATATCTCGATTGAAGAATTAGCGAAAAGGATGAAGA TCATAAGTGAAAGATCCAATGTGATCGGTCAGACAATCGTCGCTACACTGGATGATTATAACCTGGCGAGGCTTCTCGAT ATCTCAAAATTCGGAGTAGAAAATGGATATCCTTTAAGATACCAGAGGGATATGTACCGGGGATTGGATATGGAATACGG AAAAATGCTCTTAAAGCAATATTGA
Upstream 100 bases:
>100_bases AGTGGATACCTGAAGTATGGAAAGTCAATAACGTTAAAGTCAATTCCATTATTTTCCTTGGGGGGAACCTCTGCTGAGAA CGGATAGGATCAAGAAAGTT
Downstream 100 bases:
>100_bases TGAGCGACAATTATAACTCCCGCCGTATTGCCTCACCTGAAAAGCTTACCCAAGAGGATCGTTGCCTCATTCCAAATCTT ACCGAACATACTTTATTCAA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MDSVYENTDGMQASLYTNGDLIDSVNWENLEDIQYMISNITDISIEELAKRMKIISERSNVIGQTIVATLDDYNLARLLD ISKFGVENGYPLRYQRDMYRGLDMEYGKMLLKQY
Sequences:
>Translated_114_residues MDSVYENTDGMQASLYTNGDLIDSVNWENLEDIQYMISNITDISIEELAKRMKIISERSNVIGQTIVATLDDYNLARLLD ISKFGVENGYPLRYQRDMYRGLDMEYGKMLLKQY >Mature_114_residues MDSVYENTDGMQASLYTNGDLIDSVNWENLEDIQYMISNITDISIEELAKRMKIISERSNVIGQTIVATLDDYNLARLLD ISKFGVENGYPLRYQRDMYRGLDMEYGKMLLKQY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13250; Mature: 13250
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSVYENTDGMQASLYTNGDLIDSVNWENLEDIQYMISNITDISIEELAKRMKIISERSN CCCCCCCCCCCEEEEEECCCEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH VIGQTIVATLDDYNLARLLDISKFGVENGYPLRYQRDMYRGLDMEYGKMLLKQY HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure MDSVYENTDGMQASLYTNGDLIDSVNWENLEDIQYMISNITDISIEELAKRMKIISERSN CCCCCCCCCCCEEEEEECCCEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH VIGQTIVATLDDYNLARLLDISKFGVENGYPLRYQRDMYRGLDMEYGKMLLKQY HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA