| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85859188
Identifier: 85859188
GI number: 85859188
Start: 1365658
End: 1366236
Strand: Direct
Name: 85859188
Synonym: SYN_02826
Alternate gene names: NA
Gene position: 1365658-1366236 (Clockwise)
Preceding gene: 85859187
Following gene: 85859189
Centisome position: 42.95
GC content: 37.65
Gene sequence:
>579_bases ATGAAGAAGATTAAAAAAGACATTTCGGATTTCAGTCATCATGAGAACGACAATTGTGGAGAAGATTATTCCACCGGAGA GTCAAATCGATCCGACTCGCTGTCTCAAGAGAAAAATTTCGGGAGCCGTTGGAAGAAATCAAAAAAAAATGCAGTCGGTT ATTGTTTAGCATTTGTTGCATTTTCTTCAGGCATTGCTTTTTTCCTGGTAGATTTCCATACATTGAAATTTAACAACGCT CCGGTTGAGAATATCACACCTGTTCAGCAGCCCGTAAAGTGTAAATTCGCATCGTTGCAGGATTTTATTATCAATTTTAA AGACGGCGGCGGAAAGGAAAAAATTTTTGTTTGTGCCTTGGCGCTGGAAATAAGCCCGGATCACAAACTTGCATTCAAAG ACGATCATTTTGACATCAGGAAAATGATTTATAAAAAACTTTTAACCTGCAGCCGGGAGAATACTTCTTTTCTTCAGGAT AGAAACCGGTTAAGGGATTTCCTTTTCGTTGAACTTAATCAGCAACTTGGGGGAAATATCGTTACCGGAATCTATTTCAC AAAATTTATGATTTTGTAA
Upstream 100 bases:
>100_bases GACAAACTGAAAACAGGGTGCCGGGATTGAGAGTCGGGATTAATCAGAATAAGAGATAAGCGAAGTTTTTACCACGTGGC CATTCTATTGACGAGATACT
Downstream 100 bases:
>100_bases TATCTTTCTGTTTTTTTAACTGAGTATATCGGCATCGCTGAAGCGTCAGAGAGAGGAATTGATTGATGAAGATTGCTGTA AGAACGAAAGAGTCTGCATA
Product: flagellar biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKKIKKDISDFSHHENDNCGEDYSTGESNRSDSLSQEKNFGSRWKKSKKNAVGYCLAFVAFSSGIAFFLVDFHTLKFNNA PVENITPVQQPVKCKFASLQDFIINFKDGGGKEKIFVCALALEISPDHKLAFKDDHFDIRKMIYKKLLTCSRENTSFLQD RNRLRDFLFVELNQQLGGNIVTGIYFTKFMIL
Sequences:
>Translated_192_residues MKKIKKDISDFSHHENDNCGEDYSTGESNRSDSLSQEKNFGSRWKKSKKNAVGYCLAFVAFSSGIAFFLVDFHTLKFNNA PVENITPVQQPVKCKFASLQDFIINFKDGGGKEKIFVCALALEISPDHKLAFKDDHFDIRKMIYKKLLTCSRENTSFLQD RNRLRDFLFVELNQQLGGNIVTGIYFTKFMIL >Mature_192_residues MKKIKKDISDFSHHENDNCGEDYSTGESNRSDSLSQEKNFGSRWKKSKKNAVGYCLAFVAFSSGIAFFLVDFHTLKFNNA PVENITPVQQPVKCKFASLQDFIINFKDGGGKEKIFVCALALEISPDHKLAFKDDHFDIRKMIYKKLLTCSRENTSFLQD RNRLRDFLFVELNQQLGGNIVTGIYFTKFMIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22030; Mature: 22030
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIKKDISDFSHHENDNCGEDYSTGESNRSDSLSQEKNFGSRWKKSKKNAVGYCLAFVA CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FSSGIAFFLVDFHTLKFNNAPVENITPVQQPVKCKFASLQDFIINFKDGGGKEKIFVCAL HHCCCEEEEEEHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCEEEEEEE ALEISPDHKLAFKDDHFDIRKMIYKKLLTCSRENTSFLQDRNRLRDFLFVELNQQLGGNI EEEECCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECHHHCCCE VTGIYFTKFMIL EHHHHHHHHHCC >Mature Secondary Structure MKKIKKDISDFSHHENDNCGEDYSTGESNRSDSLSQEKNFGSRWKKSKKNAVGYCLAFVA CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FSSGIAFFLVDFHTLKFNNAPVENITPVQQPVKCKFASLQDFIINFKDGGGKEKIFVCAL HHCCCEEEEEEHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCEEEEEEE ALEISPDHKLAFKDDHFDIRKMIYKKLLTCSRENTSFLQDRNRLRDFLFVELNQQLGGNI EEEECCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECHHHCCCE VTGIYFTKFMIL EHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA