Click here to switch to the map view.

The map label for this gene is fliQ [H]

Identifier: 85859181

GI number: 85859181

Start: 1358178

End: 1358447

Strand: Direct

Name: fliQ [H]

Synonym: SYN_02834

Alternate gene names: 85859181

Gene position: 1358178-1358447 (Clockwise)

Preceding gene: 85859180

Following gene: 85859182

Centisome position: 42.72

GC content: 47.78

Gene sequence:

>270_bases
ATGACTCCTGATTTTGTTGTCGGTATCATGGCTGAAGCCATCAAAGTCACACTCTTAGTGGCCGGTCCACTCCTGATCGT
CGGGCTTGTTGTTGGTGTGGCGATCAGTCTGTTCCAGGCCGTCACGCAAGTGCAGGAAATGACGCTGGTTTTTGTTCCGA
AAATCGTTGCCGTACTTGTTGCCCTGGTGGCCACACTGCCCTGGATGATCAATCTTCTGCTTACATTTACCCATAACCTT
TATTCCAACATCCCCAATTATGTAAAATAA

Upstream 100 bases:

>100_bases
CTTTCAAGCTGCTGTTATTCGTCCTGGTGGATGGATGGTATTTGATTATCGGATCGCTCGTTCAGAGTTTTCATTAGAAA
ATTTTATAAGGAAAGAATTC

Downstream 100 bases:

>100_bases
AGATCAGGCAATAGACGTGTTTTCAACCCCCGGGATATTCTCATGAACCTGCCTGTCATTACTCCGGAGCAGATTGCCTG
TCTGATTTTCATTTTTTTGC

Product: flagellar biosynthetic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MTPDFVVGIMAEAIKVTLLVAGPLLIVGLVVGVAISLFQAVTQVQEMTLVFVPKIVAVLVALVATLPWMINLLLTFTHNL
YSNIPNYVK

Sequences:

>Translated_89_residues
MTPDFVVGIMAEAIKVTLLVAGPLLIVGLVVGVAISLFQAVTQVQEMTLVFVPKIVAVLVALVATLPWMINLLLTFTHNL
YSNIPNYVK
>Mature_88_residues
TPDFVVGIMAEAIKVTLLVAGPLLIVGLVVGVAISLFQAVTQVQEMTLVFVPKIVAVLVALVATLPWMINLLLTFTHNLY
SNIPNYVK

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

Organism=Escherichia coli, GI1788260, Length=85, Percent_Identity=51.7647058823529, Blast_Score=62, Evalue=5e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006305 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9606; Mature: 9475

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDFVVGIMAEAIKVTLLVAGPLLIVGLVVGVAISLFQAVTQVQEMTLVFVPKIVAVLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVATLPWMINLLLTFTHNLYSNIPNYVK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TPDFVVGIMAEAIKVTLLVAGPLLIVGLVVGVAISLFQAVTQVQEMTLVFVPKIVAVLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVATLPWMINLLLTFTHNLYSNIPNYVK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]