Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is ybjG [C]

Identifier: 85858338

GI number: 85858338

Start: 505247

End: 505975

Strand: Direct

Name: ybjG [C]

Synonym: SYN_02354

Alternate gene names: 85858338

Gene position: 505247-505975 (Clockwise)

Preceding gene: 85858337

Following gene: 85858339

Centisome position: 15.89

GC content: 51.3

Gene sequence:

>729_bases
TTGGCTCCCAAGGGCGAGACGGGATTTTTGATCGGAGGAATCAACTTGAATTCTCTGCGAAATAGACTGAAGACCAGAAT
TCTCGTAGTCGCCGCGTCTCTTGCATTTACTTTATGGGTTTTTATAGAAGTGGCTGAAGAGGTTTGGGAAGGTGAAGCAG
GAGTGTTTGATCGCTCCATTTTACTAAGTCTGCACACGTCCAGTGGCCCAGACAATGTGCTTGGGCCAATATGGCTGCAG
GCAGTGGCACGTGACGTCTCAGCGCTGGGCAGCATTACAGTGCTGGGCATTATCGTAGCAGTTGTTACCCTCTTTCTTCT
TCTTACCGGCAGGCGCATGATTGCGATGTTTTTACTGTTGGCCTCCACGAGCGGGGGGCTAGCAACATTCTTGCTCAAGG
CGGTTTTCAACCGGCCCCGACCAGAGCTTTTTCAGCATGGAGACTATGTAATTTCGGCTAGTTTTCCCAGCGGACATGCA
ATGATTGCTGCTTTGGTATATCTGACGCTGGGAGCCTTGATGGCGCAGGTAATGCCGATACGCAAGCTCAAAGTGTATGT
CATGACCGTCATGCTGGCGCTGACCGTAATTATCGGTGCCAGCCGTGTTTATCTAGGCGTACATTGGCCAACTGACGTGC
TGGCTGGTTGGTTTGCAGGTGCATCATGGGCGCTCGGTTGGTGGATCATTGCTGAATTCTACAAGGTCAAATCGGGGAGC
CGGGTTTGA

Upstream 100 bases:

>100_bases
TCAGGTACAAAACTAATCTTTGAATCCAGAGCAGATAATGGATGGTTGCATTGATCAGGCTCCAGTAGCTCAGAAAAGAG
AGCGGGTTTTTTATTGTTGA

Downstream 100 bases:

>100_bases
AAGGACAATCATTTTACAAGCGAGTGGGTTTTGCCCTGTGCGGTCTGAAGATGGCGGCGCGGCGGGAGAAGAGCTTTCGC
ACTCATCTGGTGGCTGCTGC

Product: phosphatidylglycerophosphatase B -like protein

Products: NA

Alternate protein names: Phosphoesterase PA-Phosphatase Related Protein; Membrane-Associated Phospholipid Phosphatase; Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Family Protein; PA-Phosphatase-Like Phosphoesterase; PAP2 Superfamily Protein; Phosphoesterase; Phosphatase; Phosphatidic Acid Phosphatase; Phosphatase PAP2-Like Family; Phospholipid Phosphatase; DedA/PAP2 Family Phospholipid Acid Phosphatase; Phosphoesterase PA-Phosphatase-Related Protein; Phosphatidylglycerophosphatase B -Like Protein; Transmembrane Acid Phosphatase Protein; PAP2 Superfamily; PAP2 Domain-Containing Protein; Integral Membrane Protein; Integral Membrane Phophoesterase; Phosphoesterase Pa-Phosphatase Like Protein; Phosphatidylglycerophosphatase; PAP2 Superfamily Membrane Protein; Phosphatidylglycerophosphatase B Homolog

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MAPKGETGFLIGGINLNSLRNRLKTRILVVAASLAFTLWVFIEVAEEVWEGEAGVFDRSILLSLHTSSGPDNVLGPIWLQ
AVARDVSALGSITVLGIIVAVVTLFLLLTGRRMIAMFLLLASTSGGLATFLLKAVFNRPRPELFQHGDYVISASFPSGHA
MIAALVYLTLGALMAQVMPIRKLKVYVMTVMLALTVIIGASRVYLGVHWPTDVLAGWFAGASWALGWWIIAEFYKVKSGS
RV

Sequences:

>Translated_242_residues
MAPKGETGFLIGGINLNSLRNRLKTRILVVAASLAFTLWVFIEVAEEVWEGEAGVFDRSILLSLHTSSGPDNVLGPIWLQ
AVARDVSALGSITVLGIIVAVVTLFLLLTGRRMIAMFLLLASTSGGLATFLLKAVFNRPRPELFQHGDYVISASFPSGHA
MIAALVYLTLGALMAQVMPIRKLKVYVMTVMLALTVIIGASRVYLGVHWPTDVLAGWFAGASWALGWWIIAEFYKVKSGS
RV
>Mature_241_residues
APKGETGFLIGGINLNSLRNRLKTRILVVAASLAFTLWVFIEVAEEVWEGEAGVFDRSILLSLHTSSGPDNVLGPIWLQA
VARDVSALGSITVLGIIVAVVTLFLLLTGRRMIAMFLLLASTSGGLATFLLKAVFNRPRPELFQHGDYVISASFPSGHAM
IAALVYLTLGALMAQVMPIRKLKVYVMTVMLALTVIIGASRVYLGVHWPTDVLAGWFAGASWALGWWIIAEFYKVKSGSR
V

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26231; Mature: 26099

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPKGETGFLIGGINLNSLRNRLKTRILVVAASLAFTLWVFIEVAEEVWEGEAGVFDRSI
CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LLSLHTSSGPDNVLGPIWLQAVARDVSALGSITVLGIIVAVVTLFLLLTGRRMIAMFLLL
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
ASTSGGLATFLLKAVFNRPRPELFQHGDYVISASFPSGHAMIAALVYLTLGALMAQVMPI
HCCCCHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
RKLKVYVMTVMLALTVIIGASRVYLGVHWPTDVLAGWFAGASWALGWWIIAEFYKVKSGS
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
RV
CC
>Mature Secondary Structure 
APKGETGFLIGGINLNSLRNRLKTRILVVAASLAFTLWVFIEVAEEVWEGEAGVFDRSI
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LLSLHTSSGPDNVLGPIWLQAVARDVSALGSITVLGIIVAVVTLFLLLTGRRMIAMFLLL
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
ASTSGGLATFLLKAVFNRPRPELFQHGDYVISASFPSGHAMIAALVYLTLGALMAQVMPI
HCCCCHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
RKLKVYVMTVMLALTVIIGASRVYLGVHWPTDVLAGWFAGASWALGWWIIAEFYKVKSGS
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
RV
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA