| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is mat [H]
Identifier: 85858313
GI number: 85858313
Start: 481958
End: 483235
Strand: Direct
Name: mat [H]
Synonym: SYN_00253
Alternate gene names: 85858313
Gene position: 481958-483235 (Clockwise)
Preceding gene: 85858308
Following gene: 85858324
Centisome position: 15.16
GC content: 51.8
Gene sequence:
>1278_bases TTGCGTCATTGCAGGAAGGGGCGGAGGGGCAGGTTTTTGCACAATTTCTGCTCAAGAACAAAGGAGGGTACGGACATGAT CCTGGTAGAAACATTAAAAGGAAAATCTGTAACCGAGCATCGGGTTGAAATTGTTGAACGCAAAGGCATCGGTCACCCCG ATTACATGTGCGATTCCATAATGGAAGCGATTTCCGTCGCCCTGTCACAGGAATATATCCGGGAGTTCGGAACTGTGCTC CATCATAACATCGATAAGGGGTTGTTGACCGCCGGCAGGGTGGAGAAGAACTTCGGCGGAGGTCAGGTCCTTGAACCCAT GGAACTGATTATCGGGGACCGGGCTACTCTCCATGTTGCAGGCCGGAAAATCCCGGTTGTCGAGATTGCCGTCGACACTG CCAAACAATGGATTCGCAGCCATATGCGGTTTATCGACCCCGACAGGCATCTTAAGTGTCGTGTCGTCCTTTCGCCGGGG TCCGAGGAACTGACGGATATTTTTACCCGGCCCGGAAAAGTCAGGGCTGCGAATGATACCTCGGCGGCAGTGGGATATTA TCCGCTGAGTCCTGCCGAGAAGGTCGTTCTGAACCTGGAGCGGCAGCTCAATTCCTCTGAATTCAAGAAAATCCATCCTG AGACAGGCGAAGATATCAAGATCATGGGCTTGCGGAACGGAAAGACGCTGGAGTTAACAGTTGCCATGCCACTGATCGCC TCTTTTGTCAGCTCTGAAAAGGACTATTTTGAGAGAAAAATGATTATTCAGAAAGAGATGGAGCAAATGCTCGGCGGGCT GCCTGAATTCAAAGGAATAAATGTCCATTACAACAACCTCGATGAGCGGGGGAGAGGGCTTGGCGGCGTTTATCTGAGCC TCCTCGGGACATCGGCGGAGGATGCGGATTCAGGTCAGGTCGGACGCGGAAACCGGGTCAACGGACTCATCTCCGTGAAC AGACCTCTGGGGACAGAGGCTGCCGCGGGGAAGAATCCTGTCAGCCATGTCGGAAAGATATACAACATACTGGCCCATAA GATCGCCCGGGAAATCTACGAAAATATCGAAGGGATCAAGGAGGTCTACGTCCTGCTTTTAAGCCGTATCGGAACGCCTG TCGACAGCCCGCAGATGGCAACAGCCCAGGTTCTTCTTGAGCGTGGGCGGGGAATTGATGAAGTTGCAAAAAGGACGGAA GAAATTTTCGAAAAGGAATTCTCGGAAATCAACGGGTTCTGCGAGGAATTAAGCGCTGGGAAATATTCCGTCTGTTAG
Upstream 100 bases:
>100_bases ATGAGAAAAAGAAATAGCAATTTGAAAGGGGTTCATTTTAAATAGAAAAAAGAGGTGCGCTTTTCTGACGACAGCAGGCT GCCCGCTACTTCTCCAGGAT
Downstream 100 bases:
>100_bases AGTCGTTTTTCTGTTCCTCGTCATTTCCTGAAAACGTCCGTCGCGCCGGGCTCCGGGGATTCCGGGTGGAGAGCGAATTT TAACTGCTTTTCGATGACTT
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MRHCRKGRRGRFLHNFCSRTKEGTDMILVETLKGKSVTEHRVEIVERKGIGHPDYMCDSIMEAISVALSQEYIREFGTVL HHNIDKGLLTAGRVEKNFGGGQVLEPMELIIGDRATLHVAGRKIPVVEIAVDTAKQWIRSHMRFIDPDRHLKCRVVLSPG SEELTDIFTRPGKVRAANDTSAAVGYYPLSPAEKVVLNLERQLNSSEFKKIHPETGEDIKIMGLRNGKTLELTVAMPLIA SFVSSEKDYFERKMIIQKEMEQMLGGLPEFKGINVHYNNLDERGRGLGGVYLSLLGTSAEDADSGQVGRGNRVNGLISVN RPLGTEAAAGKNPVSHVGKIYNILAHKIAREIYENIEGIKEVYVLLLSRIGTPVDSPQMATAQVLLERGRGIDEVAKRTE EIFEKEFSEINGFCEELSAGKYSVC
Sequences:
>Translated_425_residues MRHCRKGRRGRFLHNFCSRTKEGTDMILVETLKGKSVTEHRVEIVERKGIGHPDYMCDSIMEAISVALSQEYIREFGTVL HHNIDKGLLTAGRVEKNFGGGQVLEPMELIIGDRATLHVAGRKIPVVEIAVDTAKQWIRSHMRFIDPDRHLKCRVVLSPG SEELTDIFTRPGKVRAANDTSAAVGYYPLSPAEKVVLNLERQLNSSEFKKIHPETGEDIKIMGLRNGKTLELTVAMPLIA SFVSSEKDYFERKMIIQKEMEQMLGGLPEFKGINVHYNNLDERGRGLGGVYLSLLGTSAEDADSGQVGRGNRVNGLISVN RPLGTEAAAGKNPVSHVGKIYNILAHKIAREIYENIEGIKEVYVLLLSRIGTPVDSPQMATAQVLLERGRGIDEVAKRTE EIFEKEFSEINGFCEELSAGKYSVC >Mature_425_residues MRHCRKGRRGRFLHNFCSRTKEGTDMILVETLKGKSVTEHRVEIVERKGIGHPDYMCDSIMEAISVALSQEYIREFGTVL HHNIDKGLLTAGRVEKNFGGGQVLEPMELIIGDRATLHVAGRKIPVVEIAVDTAKQWIRSHMRFIDPDRHLKCRVVLSPG SEELTDIFTRPGKVRAANDTSAAVGYYPLSPAEKVVLNLERQLNSSEFKKIHPETGEDIKIMGLRNGKTLELTVAMPLIA SFVSSEKDYFERKMIIQKEMEQMLGGLPEFKGINVHYNNLDERGRGLGGVYLSLLGTSAEDADSGQVGRGNRVNGLISVN RPLGTEAAAGKNPVSHVGKIYNILAHKIAREIYENIEGIKEVYVLLLSRIGTPVDSPQMATAQVLLERGRGIDEVAKRTE EIFEKEFSEINGFCEELSAGKYSVC
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP [H]
COG id: COG1812
COG function: function code E; Archaeal S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002795 - ProDom: PD011777 [H]
Pfam domain/function: PF01941 AdoMet_Synthase [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 47285; Mature: 47285
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHCRKGRRGRFLHNFCSRTKEGTDMILVETLKGKSVTEHRVEIVERKGIGHPDYMCDSI CCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHH MEAISVALSQEYIREFGTVLHHNIDKGLLTAGRVEKNFGGGQVLEPMELIIGDRATLHVA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHCCCCCCCHHHHHHHHHCCCEEEEEC GRKIPVVEIAVDTAKQWIRSHMRFIDPDRHLKCRVVLSPGSEELTDIFTRPGKVRAANDT CCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCCCEEECCCC SAAVGYYPLSPAEKVVLNLERQLNSSEFKKIHPETGEDIKIMGLRNGKTLELTVAMPLIA CCEEEEECCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEECCCCEEEEEEHHHHHH SFVSSEKDYFERKMIIQKEMEQMLGGLPEFKGINVHYNNLDERGRGLGGVYLSLLGTSAE HHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHCCCHHHHHHHHHCCCCC DADSGQVGRGNRVNGLISVNRPLGTEAAAGKNPVSHVGKIYNILAHKIAREIYENIEGIK CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVYVLLLSRIGTPVDSPQMATAQVLLERGRGIDEVAKRTEEIFEKEFSEINGFCEELSAG HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KYSVC CCCCC >Mature Secondary Structure MRHCRKGRRGRFLHNFCSRTKEGTDMILVETLKGKSVTEHRVEIVERKGIGHPDYMCDSI CCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHH MEAISVALSQEYIREFGTVLHHNIDKGLLTAGRVEKNFGGGQVLEPMELIIGDRATLHVA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHCCCCCCCHHHHHHHHHCCCEEEEEC GRKIPVVEIAVDTAKQWIRSHMRFIDPDRHLKCRVVLSPGSEELTDIFTRPGKVRAANDT CCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCCCEEECCCC SAAVGYYPLSPAEKVVLNLERQLNSSEFKKIHPETGEDIKIMGLRNGKTLELTVAMPLIA CCEEEEECCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEECCCCEEEEEEHHHHHH SFVSSEKDYFERKMIIQKEMEQMLGGLPEFKGINVHYNNLDERGRGLGGVYLSLLGTSAE HHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHCCCHHHHHHHHHCCCCC DADSGQVGRGNRVNGLISVNRPLGTEAAAGKNPVSHVGKIYNILAHKIAREIYENIEGIK CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVYVLLLSRIGTPVDSPQMATAQVLLERGRGIDEVAKRTEEIFEKEFSEINGFCEELSAG HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KYSVC CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]