| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is glgP [H]
Identifier: 85858290
GI number: 85858290
Start: 458356
End: 458745
Strand: Direct
Name: glgP [H]
Synonym: SYN_02600
Alternate gene names: 85858290
Gene position: 458356-458745 (Clockwise)
Preceding gene: 85858289
Following gene: 85858293
Centisome position: 14.42
GC content: 54.62
Gene sequence:
>390_bases TTGGAGGCGACGGCAGCCAACACGGTGTTTACAACCCATACACCGGTGCCGGCAGGACATGACCTCTTCGAGCAGGAAAT GATCTGGGGCTACTTCAGAGATTGCTTTAACGATCTGGGTGTGCAGCGCGACGATTTCATGAGGCTGGGCGGCGCGAGTT ACGGCCGGGATTTTAACATGACGAAACTGGCACTCAGCGGGACACGCCACCATAATGGCGTGTCCCGAATCCACGGAAGG GTTTCCTCTATAATTCTGTCCGATATGTGGCCTCAGGTACGTCCATGTGAGTCCCCTATGGACTTCATCACCAATGGAGT CCATGTTTCCACCTTCCTTGCCAAGGAATGGCAGGACCCGTTCGAGATGGGCTTGATGATGTGGCTGTGA
Upstream 100 bases:
>100_bases CTCTTTCTGGCGCTCCGGCAGCCAGTGGCTGATGAAGACGTCACGCTCCAAGCTGAAGTAGGCCATGGCTAGGTGAAGTG CCTCGGCCATCCATGCAGCC
Downstream 100 bases:
>100_bases GAACCATGCTGAAACGACCGGCACATGTCCGTAACTTCTTCAAACACCCAAAGGCGGCCTGCGCCGCCTGAGATGAACCT GTTAAATTGCTGGAGTTATA
Product: glycogen phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MEATAANTVFTTHTPVPAGHDLFEQEMIWGYFRDCFNDLGVQRDDFMRLGGASYGRDFNMTKLALSGTRHHNGVSRIHGR VSSIILSDMWPQVRPCESPMDFITNGVHVSTFLAKEWQDPFEMGLMMWL
Sequences:
>Translated_129_residues MEATAANTVFTTHTPVPAGHDLFEQEMIWGYFRDCFNDLGVQRDDFMRLGGASYGRDFNMTKLALSGTRHHNGVSRIHGR VSSIILSDMWPQVRPCESPMDFITNGVHVSTFLAKEWQDPFEMGLMMWL >Mature_129_residues MEATAANTVFTTHTPVPAGHDLFEQEMIWGYFRDCFNDLGVQRDDFMRLGGASYGRDFNMTKLALSGTRHHNGVSRIHGR VSSIILSDMWPQVRPCESPMDFITNGVHVSTFLAKEWQDPFEMGLMMWL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 14715; Mature: 14715
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEATAANTVFTTHTPVPAGHDLFEQEMIWGYFRDCFNDLGVQRDDFMRLGGASYGRDFNM CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC TKLALSGTRHHNGVSRIHGRVSSIILSDMWPQVRPCESPMDFITNGVHVSTFLAKEWQDP HHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCH FEMGLMMWL HHHHHHHCC >Mature Secondary Structure MEATAANTVFTTHTPVPAGHDLFEQEMIWGYFRDCFNDLGVQRDDFMRLGGASYGRDFNM CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCC TKLALSGTRHHNGVSRIHGRVSSIILSDMWPQVRPCESPMDFITNGVHVSTFLAKEWQDP HHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCH FEMGLMMWL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]