Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858287

Identifier: 85858287

GI number: 85858287

Start: 454181

End: 454477

Strand: Direct

Name: 85858287

Synonym: SYN_02596

Alternate gene names: NA

Gene position: 454181-454477 (Clockwise)

Preceding gene: 85858286

Following gene: 85858288

Centisome position: 14.29

GC content: 45.79

Gene sequence:

>297_bases
ATGAGTAGTGAAGAGTACTTGAAAACAGATCATCAGCTAAGCAGTCCTGTATTTAAATTTGAAGTCTACGGCGAAGAGCT
CATATGCAAGAAAGTAAAGCGGAGCGGGGGTTGCGGCCACTTTTACGTGCCTGCGAGCTGGAGCGGTAAACATATCAAAA
TTATGGATGGAAAATCATTGCCAATGTCGGGATTGGACCCGGCTGTTTACCAGTCAGGTCAATATAGAGGAAAAGGCGAT
CACGAAGCGGGAAACCGTCATCTGAGGAGAATCATAGGGATGATGACACCAAAGTGA

Upstream 100 bases:

>100_bases
GTGCCTCTGGACTGGGTCGGGAAACATGTCGAAGTTATTCGGATTGACTGAGTTGCAGCAAAAAATGTCACGATAAGTGA
GATCCCTGGACGGATTCATT

Downstream 100 bases:

>100_bases
TCTTTCTTAAATTTGAATTTAAAGGAGAAAGGAAAGATGTCCAAAGTAATCAGTGCAGAAAAGGCGGCGGAGCTGATCAA
AGACGGAACGACGGTAGCAT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSSEEYLKTDHQLSSPVFKFEVYGEELICKKVKRSGGCGHFYVPASWSGKHIKIMDGKSLPMSGLDPAVYQSGQYRGKGD
HEAGNRHLRRIIGMMTPK

Sequences:

>Translated_98_residues
MSSEEYLKTDHQLSSPVFKFEVYGEELICKKVKRSGGCGHFYVPASWSGKHIKIMDGKSLPMSGLDPAVYQSGQYRGKGD
HEAGNRHLRRIIGMMTPK
>Mature_97_residues
SSEEYLKTDHQLSSPVFKFEVYGEELICKKVKRSGGCGHFYVPASWSGKHIKIMDGKSLPMSGLDPAVYQSGQYRGKGDH
EAGNRHLRRIIGMMTPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11003; Mature: 10872

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSEEYLKTDHQLSSPVFKFEVYGEELICKKVKRSGGCGHFYVPASWSGKHIKIMDGKSL
CCCCHHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCC
PMSGLDPAVYQSGQYRGKGDHEAGNRHLRRIIGMMTPK
CCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSEEYLKTDHQLSSPVFKFEVYGEELICKKVKRSGGCGHFYVPASWSGKHIKIMDGKSL
CCCHHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCC
PMSGLDPAVYQSGQYRGKGDHEAGNRHLRRIIGMMTPK
CCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA