Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
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Accession | NC_007759 |
Length | 3,179,300 |
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The map label for this gene is 85858287
Identifier: 85858287
GI number: 85858287
Start: 454181
End: 454477
Strand: Direct
Name: 85858287
Synonym: SYN_02596
Alternate gene names: NA
Gene position: 454181-454477 (Clockwise)
Preceding gene: 85858286
Following gene: 85858288
Centisome position: 14.29
GC content: 45.79
Gene sequence:
>297_bases ATGAGTAGTGAAGAGTACTTGAAAACAGATCATCAGCTAAGCAGTCCTGTATTTAAATTTGAAGTCTACGGCGAAGAGCT CATATGCAAGAAAGTAAAGCGGAGCGGGGGTTGCGGCCACTTTTACGTGCCTGCGAGCTGGAGCGGTAAACATATCAAAA TTATGGATGGAAAATCATTGCCAATGTCGGGATTGGACCCGGCTGTTTACCAGTCAGGTCAATATAGAGGAAAAGGCGAT CACGAAGCGGGAAACCGTCATCTGAGGAGAATCATAGGGATGATGACACCAAAGTGA
Upstream 100 bases:
>100_bases GTGCCTCTGGACTGGGTCGGGAAACATGTCGAAGTTATTCGGATTGACTGAGTTGCAGCAAAAAATGTCACGATAAGTGA GATCCCTGGACGGATTCATT
Downstream 100 bases:
>100_bases TCTTTCTTAAATTTGAATTTAAAGGAGAAAGGAAAGATGTCCAAAGTAATCAGTGCAGAAAAGGCGGCGGAGCTGATCAA AGACGGAACGACGGTAGCAT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSSEEYLKTDHQLSSPVFKFEVYGEELICKKVKRSGGCGHFYVPASWSGKHIKIMDGKSLPMSGLDPAVYQSGQYRGKGD HEAGNRHLRRIIGMMTPK
Sequences:
>Translated_98_residues MSSEEYLKTDHQLSSPVFKFEVYGEELICKKVKRSGGCGHFYVPASWSGKHIKIMDGKSLPMSGLDPAVYQSGQYRGKGD HEAGNRHLRRIIGMMTPK >Mature_97_residues SSEEYLKTDHQLSSPVFKFEVYGEELICKKVKRSGGCGHFYVPASWSGKHIKIMDGKSLPMSGLDPAVYQSGQYRGKGDH EAGNRHLRRIIGMMTPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11003; Mature: 10872
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEEYLKTDHQLSSPVFKFEVYGEELICKKVKRSGGCGHFYVPASWSGKHIKIMDGKSL CCCCHHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCC PMSGLDPAVYQSGQYRGKGDHEAGNRHLRRIIGMMTPK CCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SSEEYLKTDHQLSSPVFKFEVYGEELICKKVKRSGGCGHFYVPASWSGKHIKIMDGKSL CCCHHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCC PMSGLDPAVYQSGQYRGKGDHEAGNRHLRRIIGMMTPK CCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA