Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
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Accession | NC_007759 |
Length | 3,179,300 |
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The map label for this gene is cat2 [H]
Identifier: 85858286
GI number: 85858286
Start: 451889
End: 453841
Strand: Direct
Name: cat2 [H]
Synonym: SYN_02594
Alternate gene names: 85858286
Gene position: 451889-453841 (Clockwise)
Preceding gene: 85858285
Following gene: 85858287
Centisome position: 14.21
GC content: 49.51
Gene sequence:
>1953_bases TTGCCCCTTAACACTGAAGTTTCACGAAAACAATCATTCAAGAGCTGGGAATCAAAGATGAACTGCAGAAACAAGAACCA TTTCCTTGAAATGTGGAAAGCGACTTATTCCGAAAAGTTCGCTGACGAAGTGGAAATATTCAGCAAAATTCGCCGGGGGG ATCGCATTTTCGTCTCTTCCGGCTGCGGAGAGCCCCAGTATCTGGTCAAGTCACTGGTTAAATACGTGGAATCCAACCCC AAGGCCATCTTCGACACGGAAATCATCCAGATTTATTCCTTTGGGGTCACACCTTACAGCGACCCGAAATTCCAGTCCAA TTTCCGCCACAACACTTTTTTCATCGGCGACAACACCAGAACATCCGTAAACGATGGCACTTCCGATTATACCCCCATCT CCATGTCCAACGTTCCGACACTCCTGCGGAGCGGCTTCGTCAGAATCGATATTGCCCTGATCCAGACCTCTCTCCCGGAT GAGAATGGTTTCCTCAGCCTGGGCGTGAGTGTCGATATGGTCAAAGCGGCCACGGAAAAAGCGTCCCTGGTTATCGCTCA GGTCAATACAAATATGCCGTATACTCACGGAGACGGATTCATCCATATTTCGGATGTCGATTATCTCATTCCCCACGATG AGCCCGTTCTGGAGTTACAGGGCTCCATTTCCAGCAAGACGGCGCAAAAGATAGGCAATTATGTCTCCCGTCTTATTCAG GATGGCGATACGATTCAAGTAGGCTTCGGAATTCTGCCTAATGAAGCCGTGGCTCATCTCAACAATAAAAAACATCTGGG AGTTCACACCTCTCTCCTAAGCGACGGCCTCATCAACCTGATCAAGCTCGGCGTGATTGACAATTCCAGGAAAAAACTGA ATCGAGGCAAGACAATCGCTTCATTCTGCATGGGATCAAGAGAGGCCTACAAATACATCCATGACAATCATTCCATCTGT TTTCGAACTATTGACTATACGAACGATCCTCTTGTCATCGCTCAGGAGGACAATATGGTGGCCATCAACAGTGCCCTGGA AATCGACCTGACCGGACAGGCCACCTCGGAGTCCATCGGCGGACGGTTTTACAGCGGCGTCGGCGCTCATCAGGATTTCA TGCGCGGTGCGGCCATGGCTCGCAATGGGAAGACTGTCTTGGCCCTGCAGTCAACTGCCATGGGCGGCAAGCTCTCCCGC ATCGTTCCCACCCTGTCTGAATCGGCCGGGGTTACGCTGAATCGAAGCGATGTCCGTTACGTCATTACGGAATACGGTAT TGCCTATCTTCACGGCAAAACGATCCGTGAGAGGGTCATGGAGCTCATTGCTATCGCGCACCCGAAATTTCGTCCGTGGC TGCTGGAAGAAGCGAAGAAACGCGGACTCATTTACCGTGATCAGACCTTCAACCACGGGCAAAAGGGAAAGTATCCGGAA CATCTTGAAACACACTGGACAACAAATTCGGGAATGAGTGTCTTTTTCCGCCCCGTTAAAGTTACGGATGAGCCTCTTTT CAGAGATTTTATTCATGCATTGTCCGACACCAGTCTTTATCTCCGGTTCTTTTCAAAGCGTTTCGACATGCCTCACGAAA GGATACAGAGCATGATTACGACGGATTATACCAGGCAAATGGCCATCTGCGCCGTAGTTCCGCTGGACAGGAAAGAAATG ATCGTGGGTGTGGGTCGTTACCAGATCGATGACAGCACTTACTGGGCCGATATCGCATTCGCTGTCCGCGATGATTACCA GAGAAGAGGCATTTGCTCGGCGTTGCTTTCCTACATGACCCATCACGCAAAGAAGAAGGGGCTTCTTGGCTTTACCGCCG CGGTACTGATGGAAAACGAGCCGATGCTTAAAACATTCGCCAAAGGAGGCTTTGATATCTCAGGAAAATTGGAATTCGGA TTCTATAATTTAAAACTTGCCTTCCGGAATTGA
Upstream 100 bases:
>100_bases AGTGCCGCCTTAAATCATGAAACATTCTTTTCTTGACCAACGGATATGAGCTAAACGCCGGTATCTGAGAAAGACGGTCT TGTAACCGGGGGGTGGAGCT
Downstream 100 bases:
>100_bases CAGTGCCTGACGCTTGATTTTTCAGGAAAGCAACCCATGGCGGCATTCCCAGTTTTCATCCGCAAAAAATCTCACGATGA GTGAGATGAATATTTATCCC
Product: acetyl-CoA CoA transferase / acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 650; Mature: 649
Protein sequence:
>650_residues MPLNTEVSRKQSFKSWESKMNCRNKNHFLEMWKATYSEKFADEVEIFSKIRRGDRIFVSSGCGEPQYLVKSLVKYVESNP KAIFDTEIIQIYSFGVTPYSDPKFQSNFRHNTFFIGDNTRTSVNDGTSDYTPISMSNVPTLLRSGFVRIDIALIQTSLPD ENGFLSLGVSVDMVKAATEKASLVIAQVNTNMPYTHGDGFIHISDVDYLIPHDEPVLELQGSISSKTAQKIGNYVSRLIQ DGDTIQVGFGILPNEAVAHLNNKKHLGVHTSLLSDGLINLIKLGVIDNSRKKLNRGKTIASFCMGSREAYKYIHDNHSIC FRTIDYTNDPLVIAQEDNMVAINSALEIDLTGQATSESIGGRFYSGVGAHQDFMRGAAMARNGKTVLALQSTAMGGKLSR IVPTLSESAGVTLNRSDVRYVITEYGIAYLHGKTIRERVMELIAIAHPKFRPWLLEEAKKRGLIYRDQTFNHGQKGKYPE HLETHWTTNSGMSVFFRPVKVTDEPLFRDFIHALSDTSLYLRFFSKRFDMPHERIQSMITTDYTRQMAICAVVPLDRKEM IVGVGRYQIDDSTYWADIAFAVRDDYQRRGICSALLSYMTHHAKKKGLLGFTAAVLMENEPMLKTFAKGGFDISGKLEFG FYNLKLAFRN
Sequences:
>Translated_650_residues MPLNTEVSRKQSFKSWESKMNCRNKNHFLEMWKATYSEKFADEVEIFSKIRRGDRIFVSSGCGEPQYLVKSLVKYVESNP KAIFDTEIIQIYSFGVTPYSDPKFQSNFRHNTFFIGDNTRTSVNDGTSDYTPISMSNVPTLLRSGFVRIDIALIQTSLPD ENGFLSLGVSVDMVKAATEKASLVIAQVNTNMPYTHGDGFIHISDVDYLIPHDEPVLELQGSISSKTAQKIGNYVSRLIQ DGDTIQVGFGILPNEAVAHLNNKKHLGVHTSLLSDGLINLIKLGVIDNSRKKLNRGKTIASFCMGSREAYKYIHDNHSIC FRTIDYTNDPLVIAQEDNMVAINSALEIDLTGQATSESIGGRFYSGVGAHQDFMRGAAMARNGKTVLALQSTAMGGKLSR IVPTLSESAGVTLNRSDVRYVITEYGIAYLHGKTIRERVMELIAIAHPKFRPWLLEEAKKRGLIYRDQTFNHGQKGKYPE HLETHWTTNSGMSVFFRPVKVTDEPLFRDFIHALSDTSLYLRFFSKRFDMPHERIQSMITTDYTRQMAICAVVPLDRKEM IVGVGRYQIDDSTYWADIAFAVRDDYQRRGICSALLSYMTHHAKKKGLLGFTAAVLMENEPMLKTFAKGGFDISGKLEFG FYNLKLAFRN >Mature_649_residues PLNTEVSRKQSFKSWESKMNCRNKNHFLEMWKATYSEKFADEVEIFSKIRRGDRIFVSSGCGEPQYLVKSLVKYVESNPK AIFDTEIIQIYSFGVTPYSDPKFQSNFRHNTFFIGDNTRTSVNDGTSDYTPISMSNVPTLLRSGFVRIDIALIQTSLPDE NGFLSLGVSVDMVKAATEKASLVIAQVNTNMPYTHGDGFIHISDVDYLIPHDEPVLELQGSISSKTAQKIGNYVSRLIQD GDTIQVGFGILPNEAVAHLNNKKHLGVHTSLLSDGLINLIKLGVIDNSRKKLNRGKTIASFCMGSREAYKYIHDNHSICF RTIDYTNDPLVIAQEDNMVAINSALEIDLTGQATSESIGGRFYSGVGAHQDFMRGAAMARNGKTVLALQSTAMGGKLSRI VPTLSESAGVTLNRSDVRYVITEYGIAYLHGKTIRERVMELIAIAHPKFRPWLLEEAKKRGLIYRDQTFNHGQKGKYPEH LETHWTTNSGMSVFFRPVKVTDEPLFRDFIHALSDTSLYLRFFSKRFDMPHERIQSMITTDYTRQMAICAVVPLDRKEMI VGVGRYQIDDSTYWADIAFAVRDDYQRRGICSALLSYMTHHAKKKGLLGFTAAVLMENEPMLKTFAKGGFDISGKLEFGF YNLKLAFRN
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=169, Percent_Identity=31.9526627218935, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1789287, Length=401, Percent_Identity=24.1895261845387, Blast_Score=73, Evalue=5e-14, Organism=Caenorhabditis elegans, GI32563853, Length=433, Percent_Identity=40.8775981524249, Blast_Score=325, Evalue=5e-89, Organism=Caenorhabditis elegans, GI17538151, Length=434, Percent_Identity=38.7096774193548, Blast_Score=302, Evalue=5e-82, Organism=Saccharomyces cerevisiae, GI6319456, Length=484, Percent_Identity=22.5206611570248, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI21358615, Length=420, Percent_Identity=39.0476190476191, Blast_Score=320, Evalue=3e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro [H]
EC number: NA
Molecular weight: Translated: 73236; Mature: 73104
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLNTEVSRKQSFKSWESKMNCRNKNHFLEMWKATYSEKFADEVEIFSKIRRGDRIFVSS CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC GCGEPQYLVKSLVKYVESNPKAIFDTEIIQIYSFGVTPYSDPKFQSNFRHNTFFIGDNTR CCCCHHHHHHHHHHHHHCCCCEEEHHHEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCC TSVNDGTSDYTPISMSNVPTLLRSGFVRIDIALIQTSLPDENGFLSLGVSVDMVKAATEK CCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEEECCCCCCCEEEECCCHHHHHHHCCC ASLVIAQVNTNMPYTHGDGFIHISDVDYLIPHDEPVLELQGSISSKTAQKIGNYVSRLIQ CEEEEEEECCCCCEECCCCEEEEECCEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHC DGDTIQVGFGILPNEAVAHLNNKKHLGVHTSLLSDGLINLIKLGVIDNSRKKLNRGKTIA CCCEEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHH SFCMGSREAYKYIHDNHSICFRTIDYTNDPLVIAQEDNMVAINSALEIDLTGQATSESIG HHHCCCHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCEEEECCEEEEEECCCCCCHHHC GRFYSGVGAHQDFMRGAAMARNGKTVLALQSTAMGGKLSRIVPTLSESAGVTLNRSDVRY CHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEECCCCEE VITEYGIAYLHGKTIRERVMELIAIAHPKFRPWLLEEAKKRGLIYRDQTFNHGQKGKYPE EEHHCCCCEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCC HLETHWTTNSGMSVFFRPVKVTDEPLFRDFIHALSDTSLYLRFFSKRFDMPHERIQSMIT HHHHCEECCCCCEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHH TDYTRQMAICAVVPLDRKEMIVGVGRYQIDDSTYWADIAFAVRDDYQRRGICSALLSYMT HHHHHHEEEEEEECCCCHHEEEECCEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHH HHAKKKGLLGFTAAVLMENEPMLKTFAKGGFDISGKLEFGFYNLKLAFRN HHHHHCCCHHEEEEEEECCCCHHHHHHCCCCCEEEEEEEEEEEEEEEECC >Mature Secondary Structure PLNTEVSRKQSFKSWESKMNCRNKNHFLEMWKATYSEKFADEVEIFSKIRRGDRIFVSS CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC GCGEPQYLVKSLVKYVESNPKAIFDTEIIQIYSFGVTPYSDPKFQSNFRHNTFFIGDNTR CCCCHHHHHHHHHHHHHCCCCEEEHHHEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCC TSVNDGTSDYTPISMSNVPTLLRSGFVRIDIALIQTSLPDENGFLSLGVSVDMVKAATEK CCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEEECCCCCCCEEEECCCHHHHHHHCCC ASLVIAQVNTNMPYTHGDGFIHISDVDYLIPHDEPVLELQGSISSKTAQKIGNYVSRLIQ CEEEEEEECCCCCEECCCCEEEEECCEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHC DGDTIQVGFGILPNEAVAHLNNKKHLGVHTSLLSDGLINLIKLGVIDNSRKKLNRGKTIA CCCEEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHH SFCMGSREAYKYIHDNHSICFRTIDYTNDPLVIAQEDNMVAINSALEIDLTGQATSESIG HHHCCCHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCEEEECCEEEEEECCCCCCHHHC GRFYSGVGAHQDFMRGAAMARNGKTVLALQSTAMGGKLSRIVPTLSESAGVTLNRSDVRY CHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEECCCCEE VITEYGIAYLHGKTIRERVMELIAIAHPKFRPWLLEEAKKRGLIYRDQTFNHGQKGKYPE EEHHCCCCEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCC HLETHWTTNSGMSVFFRPVKVTDEPLFRDFIHALSDTSLYLRFFSKRFDMPHERIQSMIT HHHHCEECCCCCEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHH TDYTRQMAICAVVPLDRKEMIVGVGRYQIDDSTYWADIAFAVRDDYQRRGICSALLSYMT HHHHHHEEEEEEECCCCHHEEEECCEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHH HHAKKKGLLGFTAAVLMENEPMLKTFAKGGFDISGKLEFGFYNLKLAFRN HHHHHCCCHHEEEEEEECCCCHHHHHHCCCCCEEEEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]