Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
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Accession | NC_007759 |
Length | 3,179,300 |
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The map label for this gene is 85858274
Identifier: 85858274
GI number: 85858274
Start: 435124
End: 436296
Strand: Direct
Name: 85858274
Synonym: SYN_01099
Alternate gene names: NA
Gene position: 435124-436296 (Clockwise)
Preceding gene: 85858273
Following gene: 85858275
Centisome position: 13.69
GC content: 51.83
Gene sequence:
>1173_bases ATGTCCTCCTTCATGAAAATCCTTTTCGTTCATAACGACTATGCCAAGCCAAGCGGTGAAGAGCATGCGGTTCAGAACAT TGCCGGCCTTCTGACGTCTCACGGTCATCAGATTTCCTGGCTGAGAACCAGCTCCGACGTCATTGGGGATTCTGCATCTC AAAAGATAAAGGCTTTCTTTTCGGGAATTTACAGCACAGATTCCCGAAGGCGAATGGAAAGTCTTCTGGACCAGGGGAAA TATGATCTCGTTCAGGTACAGAACCTCTATCCGTTTCTTTCACCTTCTGTCCTTGCACCTTGCCGGACCCGTGGGATTCC CATAGTCATGCGCTGTCCAAATTATCGGTTGTTCTGTCCCAATGGATTGCACTTATCGCACGGCCAGGTGTGCGAGCGCT GCGTGGGCGGCCGGGAATGGCAATGCATTCTTCGAAACTGCCTTGACGGCCGATTGAAAAGTGCCGGTTACGCGGTTCGG AATGCGTTTGCAAGAATGACCAGGATGATTCTCGACAATGTCACGATATTCGTTGTCCTTTCGGAGTTTCAGAAACGGCG CTTCATGGATGCGGGTATTCCGGCTGAACGAATTGAAATCCTGCCGAATATTGCGCCGAAAATGGATGGGAATGTCGACG AAAATGATGAGAGTGACGCCATTTCTTTTGTTGGAAGAGTGAGCCCCGAGAAAGGCATTCTGGAGTTTCTCGATGCCGCC CGCAAGCTTCCCCGGAATCGGTTCGTTGTTGCCGGCAGTACGGATGCCATGCCGGAAGTCACAAGACTGGCTCCCGCCAA TGTTGAATTTACTGGGTTTTTGCGGGGGAAGGATCTGGATGACATATTCTACAGGAGCAGGCTGCTTGTTTTCCCCAGTC TCTGGTTTGAAGGGTTCCCGAATGTGGTGGCCCAGGCGATGGCCTGCGGCAAACCCGTGGTCGCCATGAAAATCGGGGCT CTGGCGGAGATCGTGGAAGATGGGAAGACAGGTCTGCTGTGTGATCTGGAAGACAGGGATGAACTGGCTCAGAAGATCGA TTTTCTGTGGAACAGGCCGGATCTTTGCCGGGAAATGGGAAAGGCCGGTCGAGAGAAAGCCCTGGCTGAGTATTCCGAAG AAAAGTTCTATTCCCGCCTGATGAAAATTTACGAGAAAGCCCTGAAGCGCTGA
Upstream 100 bases:
>100_bases ACCTATACTTTGTATCCCATCTGAATTCGATTCCGGGATGCACAGAGTAATGACTGCCGTCCCTGAAAATCAAAAAATCA AGATCTGACCCTGAAATTTC
Downstream 100 bases:
>100_bases TGGCACAAACCGGCACCCAGAGCTTGTTCGGCTATCGCATCAGCAACCGCGGCCTGAGTGGGGATATCGAGTTTGCCTCT CAAGCCCTTCTGGGAAGATC
Product: lipopolysaccharide N-acetylglucosaminyltransferase
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MSSFMKILFVHNDYAKPSGEEHAVQNIAGLLTSHGHQISWLRTSSDVIGDSASQKIKAFFSGIYSTDSRRRMESLLDQGK YDLVQVQNLYPFLSPSVLAPCRTRGIPIVMRCPNYRLFCPNGLHLSHGQVCERCVGGREWQCILRNCLDGRLKSAGYAVR NAFARMTRMILDNVTIFVVLSEFQKRRFMDAGIPAERIEILPNIAPKMDGNVDENDESDAISFVGRVSPEKGILEFLDAA RKLPRNRFVVAGSTDAMPEVTRLAPANVEFTGFLRGKDLDDIFYRSRLLVFPSLWFEGFPNVVAQAMACGKPVVAMKIGA LAEIVEDGKTGLLCDLEDRDELAQKIDFLWNRPDLCREMGKAGREKALAEYSEEKFYSRLMKIYEKALKR
Sequences:
>Translated_390_residues MSSFMKILFVHNDYAKPSGEEHAVQNIAGLLTSHGHQISWLRTSSDVIGDSASQKIKAFFSGIYSTDSRRRMESLLDQGK YDLVQVQNLYPFLSPSVLAPCRTRGIPIVMRCPNYRLFCPNGLHLSHGQVCERCVGGREWQCILRNCLDGRLKSAGYAVR NAFARMTRMILDNVTIFVVLSEFQKRRFMDAGIPAERIEILPNIAPKMDGNVDENDESDAISFVGRVSPEKGILEFLDAA RKLPRNRFVVAGSTDAMPEVTRLAPANVEFTGFLRGKDLDDIFYRSRLLVFPSLWFEGFPNVVAQAMACGKPVVAMKIGA LAEIVEDGKTGLLCDLEDRDELAQKIDFLWNRPDLCREMGKAGREKALAEYSEEKFYSRLMKIYEKALKR >Mature_389_residues SSFMKILFVHNDYAKPSGEEHAVQNIAGLLTSHGHQISWLRTSSDVIGDSASQKIKAFFSGIYSTDSRRRMESLLDQGKY DLVQVQNLYPFLSPSVLAPCRTRGIPIVMRCPNYRLFCPNGLHLSHGQVCERCVGGREWQCILRNCLDGRLKSAGYAVRN AFARMTRMILDNVTIFVVLSEFQKRRFMDAGIPAERIEILPNIAPKMDGNVDENDESDAISFVGRVSPEKGILEFLDAAR KLPRNRFVVAGSTDAMPEVTRLAPANVEFTGFLRGKDLDDIFYRSRLLVFPSLWFEGFPNVVAQAMACGKPVVAMKIGAL AEIVEDGKTGLLCDLEDRDELAQKIDFLWNRPDLCREMGKAGREKALAEYSEEKFYSRLMKIYEKALKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 43980; Mature: 43849
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFMKILFVHNDYAKPSGEEHAVQNIAGLLTSHGHQISWLRTSSDVIGDSASQKIKAFF CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCHHHHHHHHHH SGIYSTDSRRRMESLLDQGKYDLVQVQNLYPFLSPSVLAPCRTRGIPIVMRCPNYRLFCP HHHHCCCHHHHHHHHHCCCCCCEEEHHHHCCCCCCCHHCCHHHCCCEEEEECCCEEEECC NGLHLSHGQVCERCVGGREWQCILRNCLDGRLKSAGYAVRNAFARMTRMILDNVTIFVVL CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH SEFQKRRFMDAGIPAERIEILPNIAPKMDGNVDENDESDAISFVGRVSPEKGILEFLDAA HHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH RKLPRNRFVVAGSTDAMPEVTRLAPANVEFTGFLRGKDLDDIFYRSRLLVFPSLWFEGFP HHCCCCCEEEECCCCCCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCH NVVAQAMACGKPVVAMKIGALAEIVEDGKTGLLCDLEDRDELAQKIDFLWNRPDLCREMG HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHH KAGREKALAEYSEEKFYSRLMKIYEKALKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSFMKILFVHNDYAKPSGEEHAVQNIAGLLTSHGHQISWLRTSSDVIGDSASQKIKAFF CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHCCHHHHHHHHHH SGIYSTDSRRRMESLLDQGKYDLVQVQNLYPFLSPSVLAPCRTRGIPIVMRCPNYRLFCP HHHHCCCHHHHHHHHHCCCCCCEEEHHHHCCCCCCCHHCCHHHCCCEEEEECCCEEEECC NGLHLSHGQVCERCVGGREWQCILRNCLDGRLKSAGYAVRNAFARMTRMILDNVTIFVVL CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH SEFQKRRFMDAGIPAERIEILPNIAPKMDGNVDENDESDAISFVGRVSPEKGILEFLDAA HHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHH RKLPRNRFVVAGSTDAMPEVTRLAPANVEFTGFLRGKDLDDIFYRSRLLVFPSLWFEGFP HHCCCCCEEEECCCCCCCHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCH NVVAQAMACGKPVVAMKIGALAEIVEDGKTGLLCDLEDRDELAQKIDFLWNRPDLCREMG HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHH KAGREKALAEYSEEKFYSRLMKIYEKALKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7896702 [H]