Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
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Accession | NC_007759 |
Length | 3,179,300 |
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The map label for this gene is 85858269
Identifier: 85858269
GI number: 85858269
Start: 429317
End: 430039
Strand: Direct
Name: 85858269
Synonym: SYN_01104
Alternate gene names: NA
Gene position: 429317-430039 (Clockwise)
Preceding gene: 85858268
Following gene: 85858270
Centisome position: 13.5
GC content: 45.64
Gene sequence:
>723_bases ATGCCGAATGACAAGTTACGTATTAGCTCACATTATCTTGGTGATTCGGGTAAAAAATACTTTGAAGATGGTTTTAAGAA GGAGAGTGAACCGGGACGACTATTCCAATCAAGATATTTCCAACCATACTGCGACAGGGATATAGATTTGCTCGATTTTG GCTGTGCCGATGGGTTCATCCTTAGGTCTCTGCCGGCCAGACGAAGAATAGGAATCGAAGTCAACCCCGCTGCCCGTCAA CGTTGTGAGGAGTTGTGTCTCAAGGAAAACACGTCTATTGAACTCCACGATACTCTAACCTGTGTCGAAAATGAAGCGGT GGATACCATCATTTCAAACCATTGCCTTGAGCATGTTCCCAACCCCATGGAGAACCTTGAACACATGAAGCGATGCTTGA GACCGCGAGGTTACTTGGTTTTGGTAGTACCTTTTGATGATTGGAGAAATGCACAACACCGGGTTTGGCAACCAAATAAT AAAGACCATCACCTCTATACCTGGTCCCCAATGAATTTGGGAAACATGGTGTCCGAGGCAGGGTTCCAGATCGTTTCCGT ATCCCTTTGCTCCCAGGCATGGAGTCCGAAAATCATCTGGATTCAGAGAAAAATGGGCGATTTCTTCTTCAAAATTGCCT GCCGTGTACTTAGTATTATCAAGAACCGGCGTGAAGTCTTACTTGTGGCCAGGAAGCCTTGCGTACAGAGCTGTCATTAT TAG
Upstream 100 bases:
>100_bases GTGACAGCCTAATCTTCACATCGAAAGCAATAGTACGGGTAACCGTATGAATAAACATCATCTTTATTAATAAACTCGTT TCATCTGGAGACTTAAGAAC
Downstream 100 bases:
>100_bases CACCATCAATTAGAGAAGTTTTATGGATCTCGTTTCAATTATAATTCCAGCTTACAACGCTGAAGCAACTCTTAAGCGTT GTTTAGACAGTGTATTTTTT
Product: cytoplasmic protein
Products: NA
Alternate protein names: Methyltransferase Domain Family
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MPNDKLRISSHYLGDSGKKYFEDGFKKESEPGRLFQSRYFQPYCDRDIDLLDFGCADGFILRSLPARRRIGIEVNPAARQ RCEELCLKENTSIELHDTLTCVENEAVDTIISNHCLEHVPNPMENLEHMKRCLRPRGYLVLVVPFDDWRNAQHRVWQPNN KDHHLYTWSPMNLGNMVSEAGFQIVSVSLCSQAWSPKIIWIQRKMGDFFFKIACRVLSIIKNRREVLLVARKPCVQSCHY
Sequences:
>Translated_240_residues MPNDKLRISSHYLGDSGKKYFEDGFKKESEPGRLFQSRYFQPYCDRDIDLLDFGCADGFILRSLPARRRIGIEVNPAARQ RCEELCLKENTSIELHDTLTCVENEAVDTIISNHCLEHVPNPMENLEHMKRCLRPRGYLVLVVPFDDWRNAQHRVWQPNN KDHHLYTWSPMNLGNMVSEAGFQIVSVSLCSQAWSPKIIWIQRKMGDFFFKIACRVLSIIKNRREVLLVARKPCVQSCHY >Mature_239_residues PNDKLRISSHYLGDSGKKYFEDGFKKESEPGRLFQSRYFQPYCDRDIDLLDFGCADGFILRSLPARRRIGIEVNPAARQR CEELCLKENTSIELHDTLTCVENEAVDTIISNHCLEHVPNPMENLEHMKRCLRPRGYLVLVVPFDDWRNAQHRVWQPNNK DHHLYTWSPMNLGNMVSEAGFQIVSVSLCSQAWSPKIIWIQRKMGDFFFKIACRVLSIIKNRREVLLVARKPCVQSCHY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28015; Mature: 27883
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNDKLRISSHYLGDSGKKYFEDGFKKESEPGRLFQSRYFQPYCDRDIDLLDFGCADGFI CCCCCEEEEHEECCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCHH LRSLPARRRIGIEVNPAARQRCEELCLKENTSIELHDTLTCVENEAVDTIISNHCLEHVP HHCCCCHHCCCEEECHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC NPMENLEHMKRCLRPRGYLVLVVPFDDWRNAQHRVWQPNNKDHHLYTWSPMNLGNMVSEA CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHC GFQIVSVSLCSQAWSPKIIWIQRKMGDFFFKIACRVLSIIKNRREVLLVARKPCVQSCHY CHHEEEHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHEEEEECCHHHHCCCC >Mature Secondary Structure PNDKLRISSHYLGDSGKKYFEDGFKKESEPGRLFQSRYFQPYCDRDIDLLDFGCADGFI CCCCEEEEHEECCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCHH LRSLPARRRIGIEVNPAARQRCEELCLKENTSIELHDTLTCVENEAVDTIISNHCLEHVP HHCCCCHHCCCEEECHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC NPMENLEHMKRCLRPRGYLVLVVPFDDWRNAQHRVWQPNNKDHHLYTWSPMNLGNMVSEA CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHC GFQIVSVSLCSQAWSPKIIWIQRKMGDFFFKIACRVLSIIKNRREVLLVARKPCVQSCHY CHHEEEHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHEEEEECCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA