| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is wecC [H]
Identifier: 85858249
GI number: 85858249
Start: 408459
End: 410108
Strand: Direct
Name: wecC [H]
Synonym: SYN_01124
Alternate gene names: 85858249
Gene position: 408459-410108 (Clockwise)
Preceding gene: 85858248
Following gene: 85858251
Centisome position: 12.85
GC content: 58.18
Gene sequence:
>1650_bases GTGAATCAATCCGATAAAACGTGGTCTGTCAGTCCTGGTGGTGAATCATTTCCTTTGCCTTTGCCGGAAGAGTACCCGGG AGAATTCGAGCGACTTCAGCAGATCGTCCAGGAGCAGCGCAGCTTGGGCCGGGAGATTGTTGTCGTCATGGGGCTGGGTT TTGTGGGGGCAGTGATGGCGGGGGTCGTGGCCGATTCGGTGGATCGCGATACCGGCAAACCGATGAAGTTCGTCATCGGG ATGCAGCGCCCTTCGGTACGATCCTATTGGAAGATCCCCCTGTTCAACCGCGGAATCGCCCCCGTGGAGGCGGAAGATCC GGAGGTCGTTCCGCTGATTGACCGCTGCGTCAACAAGAAAAAGACCCTGATGGCCACCTATACGGATGATGTCCTTTCCC TGGCCGATGTTGTGGTCGTCGATGTCCAGTGCGACTATTTCAAGGAATGCCTGGGCAATGTCCGGGAAGGGCATGCGGAA ATCGCCGCGCTGGAGGACAGCCTGCGCATCCTGGGGGAAAAGATCCGACCGGAATGCCTCGTCCTGATCGAAACGACGGT TCCGCCGGGGACAACGGAATATATCGCCTATCCCATCATCAAGAAGGCCTTTGAAAAGCGCGGACTAAAGGATGCGGAGC CTCTGCTGGGCCATTCCTTCGAGCGGGTCATGCCGGGCCGGGAGTATGTGGCCTCCATCCGGGATTTCTGGCGGGTCTGC AGCGGGATCAACGATACCGCCAGAGAGCGGGTGCGGAAGTTCCTGTCGGATATACTGAATGTGGAAAAATATCCCCTGAC CGTTCTGGACCGTCCCATCGAGAGCGAGACCTGCAAGATTGTGGAAAATTCCTACCGGGCGACCCTCCTGGCCTTCCTGG ATGAATGGAGCCTGTTTGCAGAACGCAACGGCGTGGATCTGATCAAGGTGATCCAGGCGATCAAGGTCCGCCCCACCCAT TCCAACATGATCTTTCCCGGACCCGGGATCGGCGGTTACTGCCTGCCCAAGGACGGCGGCCTGGGGGTCTGGTCCTACCG GACCCTGATGGGATATGATGATGAAATCTTCAGGCTGACGCCCATGGCAATCGATATCAACGACACCCGGGCGCTTCACG CCGCGGAGCTGGTGCGGGATGCCCTCAGGAACATGGGCAAGATCGTCGCGGCCTCGAAGATTGCCATTCTCGGGGCCTCA TACCGGGAAGATGTGGGGGACACCCGCTACAGCGGCTCGGAGATCCTGGTCCGCAAGCTGACGGAAATGGGCGCTGAAAT TTCCGTTCATGATCCTTATGTCCAGCACTGGTGGGAGTTTGAAAAACAGGAGAGCTATCCGGCAACCGGTCACTCCTGGT CCCGATTCTTCCGCAATCAGGAAAGGCTCAGTGAACTCCGCATCAGCAAGGATCTGGGGGAGGCCCTGGATGGATCCGAT GCCGCTGTCTTAGCCGTCCGTCACCAGCTCTACCTGAGCTTGACGCCGGATGATATCGTCCGCATGGCCGGTCGGCCGAT TGCCGTGGTGGACTGTTTCGGGATTCTCTATGACGAGGGAATCCGGCGGTTTATTGAACTGGGATGCGAAGTCAAAGGCC TGGGACGCGGCCACATCAGGCGGATCAAGGATCAGGTGCAAAAAAGATGA
Upstream 100 bases:
>100_bases CATTAGAACCGCCTGGGACTGGGAACTGAAGTACCGGTCCCTTCTGAAAGGAAAGGTGTGAAACCCCTGACAATAAAACT CATACAAGAAAGGAATCCAA
Downstream 100 bases:
>100_bases GAAAATGCCGGTCGCTGACACCGCCTTTCCTTCCCTCCAATCAGGCAATCATCCCCAGTTGTTGCTGAAACAACGCCCTG ATTCAATTCATCATTCCTCC
Product: UDP-glucose 6-dehydrogenase
Products: UDP-N-acetyl-D-mannosaminuronic-acid; NADH; Proton [C]
Alternate protein names: UDP-ManNAc 6-dehydrogenase [H]
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MNQSDKTWSVSPGGESFPLPLPEEYPGEFERLQQIVQEQRSLGREIVVVMGLGFVGAVMAGVVADSVDRDTGKPMKFVIG MQRPSVRSYWKIPLFNRGIAPVEAEDPEVVPLIDRCVNKKKTLMATYTDDVLSLADVVVVDVQCDYFKECLGNVREGHAE IAALEDSLRILGEKIRPECLVLIETTVPPGTTEYIAYPIIKKAFEKRGLKDAEPLLGHSFERVMPGREYVASIRDFWRVC SGINDTARERVRKFLSDILNVEKYPLTVLDRPIESETCKIVENSYRATLLAFLDEWSLFAERNGVDLIKVIQAIKVRPTH SNMIFPGPGIGGYCLPKDGGLGVWSYRTLMGYDDEIFRLTPMAIDINDTRALHAAELVRDALRNMGKIVAASKIAILGAS YREDVGDTRYSGSEILVRKLTEMGAEISVHDPYVQHWWEFEKQESYPATGHSWSRFFRNQERLSELRISKDLGEALDGSD AAVLAVRHQLYLSLTPDDIVRMAGRPIAVVDCFGILYDEGIRRFIELGCEVKGLGRGHIRRIKDQVQKR
Sequences:
>Translated_549_residues MNQSDKTWSVSPGGESFPLPLPEEYPGEFERLQQIVQEQRSLGREIVVVMGLGFVGAVMAGVVADSVDRDTGKPMKFVIG MQRPSVRSYWKIPLFNRGIAPVEAEDPEVVPLIDRCVNKKKTLMATYTDDVLSLADVVVVDVQCDYFKECLGNVREGHAE IAALEDSLRILGEKIRPECLVLIETTVPPGTTEYIAYPIIKKAFEKRGLKDAEPLLGHSFERVMPGREYVASIRDFWRVC SGINDTARERVRKFLSDILNVEKYPLTVLDRPIESETCKIVENSYRATLLAFLDEWSLFAERNGVDLIKVIQAIKVRPTH SNMIFPGPGIGGYCLPKDGGLGVWSYRTLMGYDDEIFRLTPMAIDINDTRALHAAELVRDALRNMGKIVAASKIAILGAS YREDVGDTRYSGSEILVRKLTEMGAEISVHDPYVQHWWEFEKQESYPATGHSWSRFFRNQERLSELRISKDLGEALDGSD AAVLAVRHQLYLSLTPDDIVRMAGRPIAVVDCFGILYDEGIRRFIELGCEVKGLGRGHIRRIKDQVQKR >Mature_549_residues MNQSDKTWSVSPGGESFPLPLPEEYPGEFERLQQIVQEQRSLGREIVVVMGLGFVGAVMAGVVADSVDRDTGKPMKFVIG MQRPSVRSYWKIPLFNRGIAPVEAEDPEVVPLIDRCVNKKKTLMATYTDDVLSLADVVVVDVQCDYFKECLGNVREGHAE IAALEDSLRILGEKIRPECLVLIETTVPPGTTEYIAYPIIKKAFEKRGLKDAEPLLGHSFERVMPGREYVASIRDFWRVC SGINDTARERVRKFLSDILNVEKYPLTVLDRPIESETCKIVENSYRATLLAFLDEWSLFAERNGVDLIKVIQAIKVRPTH SNMIFPGPGIGGYCLPKDGGLGVWSYRTLMGYDDEIFRLTPMAIDINDTRALHAAELVRDALRNMGKIVAASKIAILGAS YREDVGDTRYSGSEILVRKLTEMGAEISVHDPYVQHWWEFEKQESYPATGHSWSRFFRNQERLSELRISKDLGEALDGSD AAVLAVRHQLYLSLTPDDIVRMAGRPIAVVDCFGILYDEGIRRFIELGCEVKGLGRGHIRRIKDQVQKR
Specific function: Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA) [H]
COG id: COG0677
COG function: function code M; UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=483, Percent_Identity=24.4306418219462, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI296040443, Length=265, Percent_Identity=27.5471698113208, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI296040438, Length=265, Percent_Identity=27.5471698113208, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI48994968, Length=344, Percent_Identity=23.8372093023256, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1788340, Length=314, Percent_Identity=21.656050955414, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: 1.1.1.- [C]
Molecular weight: Translated: 61800; Mature: 61800
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSDKTWSVSPGGESFPLPLPEEYPGEFERLQQIVQEQRSLGREIVVVMGLGFVGAVMA CCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH GVVADSVDRDTGKPMKFVIGMQRPSVRSYWKIPLFNRGIAPVEAEDPEVVPLIDRCVNKK HHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCC KTLMATYTDDVLSLADVVVVDVQCDYFKECLGNVREGHAEIAALEDSLRILGEKIRPECL CEEEEEHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEE VLIETTVPPGTTEYIAYPIIKKAFEKRGLKDAEPLLGHSFERVMPGREYVASIRDFWRVC EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHH SGINDTARERVRKFLSDILNVEKYPLTVLDRPIESETCKIVENSYRATLLAFLDEWSLFA CCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ERNGVDLIKVIQAIKVRPTHSNMIFPGPGIGGYCLPKDGGLGVWSYRTLMGYDDEIFRLT CCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCEECCCCCCCCHHHHHHHHCCCCCEEEEE PMAIDINDTRALHAAELVRDALRNMGKIVAASKIAILGASYREDVGDTRYSGSEILVRKL CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHCCCCCCCCHHHHHHHH TEMGAEISVHDPYVQHWWEFEKQESYPATGHSWSRFFRNQERLSELRISKDLGEALDGSD HHCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AAVLAVRHQLYLSLTPDDIVRMAGRPIAVVDCFGILYDEGIRRFIELGCEVKGLGRGHIR HHHHEEEEEEEEEECHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCEECCCHHHHH RIKDQVQKR HHHHHHHCC >Mature Secondary Structure MNQSDKTWSVSPGGESFPLPLPEEYPGEFERLQQIVQEQRSLGREIVVVMGLGFVGAVMA CCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH GVVADSVDRDTGKPMKFVIGMQRPSVRSYWKIPLFNRGIAPVEAEDPEVVPLIDRCVNKK HHHHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCC KTLMATYTDDVLSLADVVVVDVQCDYFKECLGNVREGHAEIAALEDSLRILGEKIRPECL CEEEEEHHHHHHHHHHHHEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEE VLIETTVPPGTTEYIAYPIIKKAFEKRGLKDAEPLLGHSFERVMPGREYVASIRDFWRVC EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHH SGINDTARERVRKFLSDILNVEKYPLTVLDRPIESETCKIVENSYRATLLAFLDEWSLFA CCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ERNGVDLIKVIQAIKVRPTHSNMIFPGPGIGGYCLPKDGGLGVWSYRTLMGYDDEIFRLT CCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCEECCCCCCCCHHHHHHHHCCCCCEEEEE PMAIDINDTRALHAAELVRDALRNMGKIVAASKIAILGASYREDVGDTRYSGSEILVRKL CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHCCCCCCCCHHHHHHHH TEMGAEISVHDPYVQHWWEFEKQESYPATGHSWSRFFRNQERLSELRISKDLGEALDGSD HHCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AAVLAVRHQLYLSLTPDDIVRMAGRPIAVVDCFGILYDEGIRRFIELGCEVKGLGRGHIR HHHHEEEEEEEEEECHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCEECCCHHHHH RIKDQVQKR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-N-acetyl-D-mannosamine; NAD [C]
Specific reaction: UDP-N-acetyl-D-mannosamine + NAD = UDP-N-acetyl-D-mannosaminuronic-acid + NADH + Proton [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]